CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4DL_F0BE36C9D
(
Triticum aestivum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Traes_4DL_F0BE36C9D
T296164_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.924
0.723
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.924
0.723
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.894
0.777
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB
VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.874
0.741
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.874
0.741
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4DL_F0BE36C9D.1
NAC/NAM
10
136
PPGFRFHPTDEELILHYLRNRAAESPCPVSIIADVDIYKFDPWALPSKASYGDREWYFFTPRDRKYPNGVRPNRAAGSGYWKATGTDKPIRCSATGESVGVKKALVFYKGRPPKGIKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Triticum aestivum
TFs
189 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.8527
Candida albicans
CaO19.8527
N
0.000
CaO19.909
Candida albicans
CaO19.909
N
0.000
CD36_17970
Candida dubliniensis
CD36_17970
N
0.000
CORT_0A11080
Candida orthopsilosis
CORT_0A11080
N
0.000
CTRG_01305
Candida tropicalis
CTRG_01305
N
0.000
DEHA2G05500g
Debaryomyces hansenii
DEHA2G05500g
N
0.000
estExt_fgenesh1_pg.C_chr_2.10193
Pichia stipitis
estExt_fgenesh1_pg.C_chr_2.10193
N
0.000
GNLVRS01_PISO0D09001g
Millerozyma farinosa
GNLVRS01_PISO0D09001g
N
0.000
PGUG_02922
Meyerozyma guilliermondii
PGUG_02922
N
0.000
PGUG_02922
Candida guilliermondii
PGUG_02922
N
0.000
PICST_66824
Scheffersomyces stipitis
PICST_66824
N
0.000
SPAPADRAFT_60816
Spathaspora passalidarum
SPAPADRAFT_60816
N
0.000