CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5BL_59AFA4B01
(
Triticum aestivum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Traes_5BL_59AFA4B01
T296189_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.890
0.728
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.890
0.728
NAC59
M11080_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC059_01
0.881
0.772
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5BL_59AFA4B01.1
NAC/NAM
71
196
PSGFRFHPTEEDIITSYPVPKVLNPTFIAIAIGEVDLNKNEPYELPKKAKMGEKEWYFYCQKDRKYLMGIRTNRATKAGYWKATGKDKEIFHPTPTLIGMKKTLVFYKGRAPRGEKTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Triticum aestivum
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy