Cla001517 (Citrullus lanatus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cla001517 T296528_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC083
M02374_2.00
Arabidopsis thaliana
WYACGYAANN

NNTTRCGTRW
PBM
Weirauch et al.(2014)
pTH7308
0.936 0.887
NAC083
M07230_2.00
Arabidopsis thaliana
TRCKTRWNNNDYAMG

CKTRHNNNWYAMGYA
Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a
0.936 0.887
NAC083
M07231_2.00
Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA

TWRCGTRHDNNWYAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a
0.936 0.887
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla001517 NAC/NAM 15 138

Links

Other NAC/NAM family TFs
Other Citrullus lanatus TFs

Invalid Input OrderBy

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action