Cla003087 (Citrullus lanatus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cla003087 T296535_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC011
M07169_2.00
Arabidopsis thaliana
RTTDCTTSNNHNDCAAGHWAY

RTWDCTTGHNDNNSAAGHAAY
Dap-seq
OMalley et al.(2016)
ANAC011_col_a
0.871 0.477
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla003087 NAC/NAM 16 146

Links

Other NAC/NAM family TFs
Other Citrullus lanatus TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANAC011 Arabidopsis thaliana AT1G32510 D 0.871
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.989
ANAC011 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002601 I 0.886
cassava3989.m1 Manihot esculenta cassava3989.m1 N 0.941
Eucgr.I00587 Eucalyptus grandis Eucgr.I00587 N 0.904
Eucgr.J00505 Eucalyptus grandis Eucgr.J00505 N 0.911
Eucgr.J00508 Eucalyptus grandis Eucgr.J00508 N 0.911
Eucgr.J00511 Eucalyptus grandis Eucgr.J00511 N 0.904
Eucgr.J00512 Eucalyptus grandis Eucgr.J00512 N 0.913
Eucgr.J00513 Eucalyptus grandis Eucgr.J00513 N 0.918
Eucgr.J00514 Eucalyptus grandis Eucgr.J00514 N 0.913
Eucgr.J00516 Eucalyptus grandis Eucgr.J00516 N 0.892
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N 0.959
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N 0.955
Eucgr.J00519 Eucalyptus grandis Eucgr.J00519 N 0.928
Eucgr.I00583 Eucalyptus grandis Eucgr.I00583 N 0.885
Eucgr.C02446 Eucalyptus grandis Eucgr.C02446 N 0.911
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.935
Cucsa.185760 Cucumis sativus Cucsa.185760 N 0.959
mgf020234m Mimulus guttatus mgf020234m N 0.966
mgf024293m Mimulus guttatus mgf024293m N 0.908
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.916
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.960
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.930
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.949
Eucgr.A02637 Eucalyptus grandis Eucgr.A02637 N 0.886
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.909
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.949
Eucgr.J00520 Eucalyptus grandis Eucgr.J00520 N 0.941
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N 0.893
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N 0.911
Pavir.Ha01768 Panicum virgatum Pavir.Ha01768 N 0.917
Pavir.Hb01808 Panicum virgatum Pavir.Hb01808 N 0.918
Pavir.J02276 Panicum virgatum Pavir.J02276 N 0.872
Pavir.J13106 Panicum virgatum Pavir.J13106 N 0.929
SapurV1A.0450s0140 Salix purpurea SapurV1A.0450s0140 N 0.875
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N 0.871
SapurV1A.1671s0050 Salix purpurea SapurV1A.1671s0050 N 0.875
SapurV1A.3648s0010 Salix purpurea SapurV1A.3648s0010 N 0.891
PK27925.1 Cannabis sativa PK27925.1 N 0.964
PK29014.1 Cannabis sativa PK29014.1 N 0.972
Pavir.Bb01366 Panicum virgatum Pavir.Bb01366 N 0.894
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.960
MDP0000759504 Malus domestica MDP0000759504 N 0.956
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.963
gene15644-v1.0-hybrid Fragaria vesca gene15644-v1.0-hybrid N 0.890
gene21734-v1.0-hybrid Fragaria vesca gene21734-v1.0-hybrid N 0.914
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.954
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.923
Gorai.006G113000 Gossypium raimondii Gorai.006G113000 N 0.934
Lus10004846.g Linum usitatissimum Lus10004846.g N 0.916
Lus10020643.g Linum usitatissimum Lus10020643.g N 0.916
Lus10029410.g Linum usitatissimum Lus10029410.g N 0.916
MDP0000130797 Malus domestica MDP0000130797 N 0.956
MDP0000205938 Malus domestica MDP0000205938 N 0.970
LjSGA_014778.2 Lotus japonicus LjSGA_014778.2 N 0.877
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.954
AMTR_s00040p00117430 Amborella trichopoda AMTR_s00040p00117430 N 0.896
MTR_2g086690 Medicago truncatula MTR_2g086690 N 0.968
MTR_4g052620 Medicago truncatula MTR_4g052620 N 0.923
MTR_7g105170 Medicago truncatula MTR_7g105170 N 0.888
OB11G12830 Oryza brachyantha OB11G12830 N 0.906
OBART11G03530 Oryza barthii OBART11G03530 N 0.913
OBART12G03440 Oryza barthii OBART12G03440 N 0.883
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N 0.915
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N 0.883
OMERI11G03230 Oryza meridionalis OMERI11G03230 N 0.915
ONIVA11G03690 Oryza nivara ONIVA11G03690 N 0.915
ONIVA12G03060 Oryza nivara ONIVA12G03060 N 0.883
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.908
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.878
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.936
NAC090 Arabidopsis thaliana AT5G22380 N 0.889
BGIOSGA034823 Oryza indica BGIOSGA034823 N 0.915
BGIOSGA037019 Oryza indica BGIOSGA037019 N 0.883
anac090 Arabidopsis lyrata fgenesh2_kg.6__2228__AT5G22380.1 N 0.885
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.935
GLYMA12G09670 Glycine max GLYMA12G09670 N 0.910
GLYMA12G31150 Glycine max GLYMA12G31150 N 0.956
GLYMA13G39160 Glycine max GLYMA13G39160 N 0.955
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.936
GRMZM2G439903 Zea mays GRMZM2G439903 N 0.924
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.941
OPUNC11G03220 Oryza punctata OPUNC11G03220 N 0.915
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N 0.915
TCM_041364 Theobroma cacao TCM_041364 N 0.947
VIT_06s0080g00780 Vitis vinifera VIT_06s0080g00780 N 0.891
VIT_18s0041g00700 Vitis vinifera VIT_18s0041g00700 N 0.902
Ca_00818 Cicer arietinum Ca_00818 N 0.880
Ca_15160 Cicer arietinum Ca_15160 N 0.910
Cla008777 Citrullus lanatus Cla008777 N 0.959
Cla018691 Citrullus lanatus Cla018691 N 0.936
Pm001403 Prunus mume Pm001403 N 0.959
Pm001404 Prunus mume Pm001404 N 0.875
30055.m001588 Ricinus communis 30055.m001588 N 0.903
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.959
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.954
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N 0.902
Si026707m.g Setaria italica Si026707m.g N 0.918
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N 0.883
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N 0.915
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N 0.915
OS11G0154500 Oryza sativa OS11G0154500 N 0.915
OS12G0156100 Oryza sativa OS12G0156100 N 0.883
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.956
POPTR_0001s22630 Populus trichocarpa POPTR_0001s22630 N 0.875
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N 0.945
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.959
Sb05g003400 Sorghum bicolor Sb05g003400 N 0.921
Si002586m.g Setaria italica Si002586m.g N 0.889
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.972