Cla013854 (Citrullus lanatus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cla013854 T296570_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC13
M07170_2.00
Arabidopsis thaliana
TDNCTTGYYNNNCAAG

CTTGNNNRRCAAGNHA
Dap-seq
OMalley et al.(2016)
ANAC013_col_a
0.880 0.719
ANAC13
M07171_2.00
Arabidopsis thaliana
CTTGYBHNNCAAGNHAH

DTDNCTTGNNDVRCAAG
Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a
0.880 0.719
ANAC13
M11077_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC013_Q2
0.880 0.719
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla013854 NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Citrullus lanatus TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.364130 Cucumis sativus Cucsa.364130 N 0.964
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.960
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.959
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.958
SapurV1A.0348s0040 Salix purpurea SapurV1A.0348s0040 I 0.952
cassava22173.valid.m1 Manihot esculenta cassava22173.valid.m1 I 0.943
TCM_036587 Theobroma cacao TCM_036587 I 0.940
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I 0.940
Ciclev10000612m.g Citrus clementina Ciclev10000612m.g I 0.935
evm.TU.supercontig_26.135 Carica papaya evm.TU.supercontig_26.135 I 0.935
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.935
Gorai.005G076200 Gossypium raimondii Gorai.005G076200 I 0.929
GLYMA10G36360 Glycine max GLYMA10G36360 N 0.918
Lus10028713.g Linum usitatissimum Lus10028713.g I 0.916
MDP0000146969 Malus domestica MDP0000146969 I 0.914
MDP0000169485 Malus domestica MDP0000169485 I 0.914
MDP0000852271 Malus domestica MDP0000852271 I 0.913
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I 0.913
gene27539-v1.0-hybrid Fragaria vesca gene27539-v1.0-hybrid N 0.913
Pm022358 Prunus mume Pm022358 N 0.912
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I 0.912
PRUPE_ppa003410mg Prunus persica PRUPE_ppa003410mg N 0.912
GLYMA20G31210 Glycine max GLYMA20G31210 N 0.912
mg018130m Mimulus guttatus mg018130m I 0.907
Cla016588 Citrullus lanatus Cla016588 N 0.904
Eucgr.F02771 Eucalyptus grandis Eucgr.F02771 N 0.903
Ca_04337 Cicer arietinum Ca_04337 N 0.899
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I 0.894
Aquca_017_00010 Aquilegia coerulea Aquca_017_00010 N 0.892
Solyc12g056790.1 Solanum lycopersicum Solyc12g056790.1 I 0.892
MTR_1g097300 Medicago truncatula MTR_1g097300 N 0.890
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I 0.883
cassava19069.valid.m1 Manihot esculenta cassava19069.valid.m1 I 0.882
ANAC13 Arabidopsis thaliana AT1G32870 D 0.880
LjSGA_007769.1 Lotus japonicus LjSGA_007769.1 N 0.878
Bo7g057730 Brassica oleracea Bo7g057730 I 0.878
Cagra.1443s0015 Capsella grandiflora Cagra.1443s0015 I 0.877
Carubv10008817m.g Capsella rubella Carubv10008817m.g I 0.875
Thhalv10007369m.g Eutrema salsugineum Thhalv10007369m.g I 0.874