Cla014492 (Citrullus lanatus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cla014492 T296573_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG

CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.964 0.827
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG

CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.961 0.818
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN

NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.961 0.818
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN

NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.931 0.745
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG

CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.931 0.745
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG

CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.931 0.745
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG

CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.925 0.727
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG

CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.925 0.727
NAC030
M00974_2.00
Arabidopsis thaliana
NYACGBMWNN

NNWKVCGTRN
PBM
Lindemose et al.(2014)
VND7
0.875 0.682
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla014492 NAC/NAM 10 147

Links

Other NAC/NAM family TFs
Other Citrullus lanatus TFs

325 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOC_0000564101 Angiostrongylus costaricensis ACOC_0000564101 N 0.000
ALUE_0001548501 Ascaris lumbricoides ALUE_0001548501 N 0.000
ASIM_0000060601 Anisakis simplex ASIM_0000060601 N 0.000
ASU_00461 Ascaris suum ASU_00461 N 0.000
Bm9460 Brugia malayi Bm9460 N 0.000
BTMF_0001424501 Brugia timori BTMF_0001424501 N 0.000
CRE14185 Caenorhabditis remanei CRE14185 N 0.000
DICVIV_06569 Dictyocaulus viviparus DICVIV_06569 N 0.000
DME_0000232601 Dracunculus medinensis DME_0000232601 N 0.000
GPLIN_001283200 Globodera pallida GPLIN_001283200 N 0.000
LOAG_02659 Loa loa LOAG_02659 N 0.000
Minc07456 Meloidogyne incognita Minc07456 N 0.000
nLs.2.1.2.g01879 Litomosoides sigmodontis nLs.2.1.2.g01879 N 0.000
nOo.2.0.1.g02403 Onchocerca ochengi nOo.2.0.1.g02403 N 0.000
SMUV_0000886501 Syphacia muris SMUV_0000886501 N 0.000
TCLT_0000829601 Thelazia callipaeda TCLT_0000829601 N 0.000
TCNE_0000991701 Toxocara canis TCNE_0000991701 N 0.000
WBGene00237415 Onchocerca volvulus WBGene00237415 N 0.000
WUBG_01611 Wuchereria bancrofti WUBG_01611 N 0.000