Cla016424 (Citrullus lanatus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cla016424 T296577_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac071
M07219_2.00
Arabidopsis thaliana
CTTSHNNYHCAMGYW

WRCKTGDRNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_col_a
0.933 0.852
anac071
M07220_2.00
Arabidopsis thaliana
CTTSHNNNNSAMGYA

TRCKTSNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a
0.933 0.852
anac096
M07237_2.00
Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC

GRTTDCKTVNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a
0.931 0.806
anac096
M07238_2.00
Arabidopsis thaliana
TTNCTTSWNNHNYAMG

CKTRNDNNWSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC096_col
0.931 0.806
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.878 0.759
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.878 0.759
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla016424 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Citrullus lanatus TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.313350 Cucumis sativus Cucsa.313350 I 0.968
cassava22941.valid.m1 Manihot esculenta cassava22941.valid.m1 I 0.966
SapurV1A.0846s0080 Salix purpurea SapurV1A.0846s0080 I 0.965
POPTR_0003s08830 Populus trichocarpa POPTR_0003s08830 I 0.965
MDP0000936269 Malus domestica MDP0000936269 I 0.965
gene10722-v1.0-hybrid Fragaria vesca gene10722-v1.0-hybrid I 0.965
PRUPE_ppa007828mg Prunus persica PRUPE_ppa007828mg I 0.962
Pm023277 Prunus mume Pm023277 I 0.962
Lus10035373.g Linum usitatissimum Lus10035373.g I 0.961
Ciclev10031966m.g Citrus clementina Ciclev10031966m.g I 0.961
orange1.1g018835m.g Citrus sinensis orange1.1g018835m.g I 0.961
PK00339.1 Cannabis sativa PK00339.1 I 0.961
Lus10030978.g Linum usitatissimum Lus10030978.g I 0.961
29827.m002555 Ricinus communis 29827.m002555 I 0.960
POPTR_0001s02710 Populus trichocarpa POPTR_0001s02710 I 0.959
MTR_5g014300 Medicago truncatula MTR_5g014300 I 0.958
Eucgr.D02182 Eucalyptus grandis Eucgr.D02182 I 0.955
VIT_02s0012g01040 Vitis vinifera VIT_02s0012g01040 I 0.954
Gorai.008G227800 Gossypium raimondii Gorai.008G227800 I 0.954
Solyc08g077110.2 Solanum lycopersicum Solyc08g077110.2 I 0.953
GLYMA05G23840 Glycine max GLYMA05G23840 I 0.953
SapurV1A.0900s0060 Salix purpurea SapurV1A.0900s0060 I 0.953
Gorai.004G186700 Gossypium raimondii Gorai.004G186700 I 0.953
GLYMA17G16500 Glycine max GLYMA17G16500 I 0.952
Cagra.3356s0092 Capsella grandiflora Cagra.3356s0092 I 0.951
Eucgr.E00298 Eucalyptus grandis Eucgr.E00298 I 0.950
evm.TU.supercontig_90.52 Carica papaya evm.TU.supercontig_90.52 I 0.950
PGSC0003DMG400017505 Solanum tuberosum PGSC0003DMG400017505 I 0.949
anac096 Arabidopsis lyrata fgenesh2_kg.8__135__AT5G46590.1 I 0.946
Ca_02274 Cicer arietinum Ca_02274 I 0.946
Ca_12837 Cicer arietinum Ca_12837 I 0.945
OB10G26350 Oryza brachyantha OB10G26350 I 0.944
Cagra.0569s0030 Capsella grandiflora Cagra.0569s0030 I 0.943
Carubv10028284m.g Capsella rubella Carubv10028284m.g I 0.943
BGIOSGA033482 Oryza indica BGIOSGA033482 I 0.943
OPUNC10G17630 Oryza punctata OPUNC10G17630 I 0.943
OLONG_018722 Oryza longistaminata OLONG_018722 I 0.943
ORUFI10G20470 Oryza rufipogon ORUFI10G20470 I 0.943
OBART10G19230 Oryza barthii OBART10G19230 I 0.943
OMERI07G08100 Oryza meridionalis OMERI07G08100 I 0.943
OGLUM10G19330 Oryza glumaepatula OGLUM10G19330 I 0.943
ONIVA10G21790 Oryza nivara ONIVA10G21790 I 0.943
ORGLA10G0144100 Oryza glaberrima ORGLA10G0144100 I 0.943
Gorai.007G031300 Gossypium raimondii Gorai.007G031300 I 0.942
BRADI3G33957 Brachypodium distachyon BRADI3G33957 I 0.942
TCM_015749 Theobroma cacao TCM_015749 I 0.942
Bra025012 Brassica rapa Bra025012 I 0.941
Carubv10007390m.g Capsella rubella Carubv10007390m.g I 0.941
Thhalv10001200m.g Eutrema salsugineum Thhalv10001200m.g I 0.941
LPERR10G15090 Leersia perrieri LPERR10G15090 I 0.941
Bo7g075540 Brassica oleracea Bo7g075540 I 0.941
Pavir.Ia03491 Panicum virgatum Pavir.Ia03491 I 0.940
Bra022046 Brassica rapa Bra022046 I 0.940
anac071 Arabidopsis lyrata Al_scaffold_0007_2395 I 0.940
Sb01g028450 Sorghum bicolor Sb01g028450 I 0.940
Si036301m.g Setaria italica Si036301m.g I 0.940
Bostr.30275s0267 Boechera stricta Bostr.30275s0267 I 0.939
GSMUA_Achr5G03360_001 Musa acuminata GSMUA_Achr5G03360_001 I 0.939
Gorai.003G180600 Gossypium raimondii Gorai.003G180600 I 0.938
GRMZM2G082709 Zea mays GRMZM2G082709 I 0.937
Traes_1AL_D6C49C3BC Triticum aestivum Traes_1AL_D6C49C3BC I 0.934
MLOC_58950 Hordeum vulgare MLOC_58950 I 0.934
Traes_1BL_8925B27BC Triticum aestivum Traes_1BL_8925B27BC I 0.934
F775_28577 Aegilops tauschii F775_28577 I 0.934
Bra012626 Brassica rapa Bra012626 I 0.933
anac071 Arabidopsis thaliana AT4G17980 D 0.933
anac096 Arabidopsis thaliana AT5G46590 D 0.931
Bo2g130240 Brassica oleracea Bo2g130240 I 0.930
Bo1g019130 Brassica oleracea Bo1g019130 I 0.930
Bra013272 Brassica rapa Bra013272 I 0.930
Bo7g105630 Brassica oleracea Bo7g105630 I 0.929
Pavir.Ib02435 Panicum virgatum Pavir.Ib02435 I 0.926
AMTR_s00149p00068500 Amborella trichopoda AMTR_s00149p00068500 I 0.925
TRIUR3_22131 Triticum urartu TRIUR3_22131 I 0.922
MDP0000119446 Malus domestica MDP0000119446 I 0.922
chr2.CM0021.650.nc Lotus japonicus chr2.CM0021.650.nc I 0.921
Solyc06g061080.2 Solanum lycopersicum Solyc06g061080.2 I 0.919
MTR_4g098630 Medicago truncatula MTR_4g098630 I 0.909
Thhalv10027064m.g Eutrema salsugineum Thhalv10027064m.g I 0.904
Aquca_044_00122 Aquilegia coerulea Aquca_044_00122 I 0.903
Bostr.4485s0006 Boechera stricta Bostr.4485s0006 I 0.901
GSMUA_Achr11G17780_001 Musa acuminata GSMUA_Achr11G17780_001 I 0.901
mgf019012m Mimulus guttatus mgf019012m I 0.896
anac028 Arabidopsis thaliana AT1G65910 D 0.878
anac028 Arabidopsis lyrata Al_scaffold_0002_1137 I 0.878
Traes_1DL_A556D8590 Triticum aestivum Traes_1DL_A556D8590 N 0.872