Cla016424 (Citrullus lanatus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cla016424 T296577_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac071
M07219_2.00
Arabidopsis thaliana
CTTSHNNYHCAMGYW

WRCKTGDRNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_col_a
0.933 0.852
anac071
M07220_2.00
Arabidopsis thaliana
CTTSHNNNNSAMGYA

TRCKTSNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a
0.933 0.852
anac096
M07237_2.00
Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC

GRTTDCKTVNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a
0.931 0.806
anac096
M07238_2.00
Arabidopsis thaliana
TTNCTTSWNNHNYAMG

CKTRNDNNWSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC096_col
0.931 0.806
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.878 0.759
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.878 0.759
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla016424 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Citrullus lanatus TFs

Invalid Input OrderBy

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action