CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm001136
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm001136
T296613_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm001136
NAC/NAM
7
140
LLGFRFRPTDQELISYFLYKKSITKDPLMASYYSNIVHEFNFLGETEPWVVWDQFGGPGLVDEDLYFFTELKNLSQKGKRIKRKIEAGGTWRETFSKKVYNKTTGNPIGQKRNLRYENQGCEDHGKWLLEEYSL
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm001156
Prunus mume
Pm001156
N
0.992
MDP0000256806
Malus domestica
MDP0000256806
N
0.957
Ciclev10033436m.g
Citrus clementina
Ciclev10033436m.g
N
0.950
orange1.1g038876m.g
Citrus sinensis
orange1.1g038876m.g
N
0.947
Ciclev10033744m.g
Citrus clementina
Ciclev10033744m.g
N
0.921
29657.m000463
Ricinus communis
29657.m000463
N
0.906
gene12168-v1.0-hybrid
Fragaria vesca
gene12168-v1.0-hybrid
N
0.889
gene12133-v1.0-hybrid
Fragaria vesca
gene12133-v1.0-hybrid
N
0.885