CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm011234
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm011234
T296646_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm011234
NAC/NAM
38
159
RVLMFHPRDEELVCDYLLKKVTQTDSTLMIEVDLNKCEPWEIPVNACVGGKEWYFYSQRDRKYATGLRTNRATAAGYWKATGKDRPILRKGSLVGMRKTLVFYQGRAPKGRKSDWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.995
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.994
PK23481.1
Cannabis sativa
PK23481.1
N
0.991
MDP0000298182
Malus domestica
MDP0000298182
N
0.988
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.986
Ca_13537
Cicer arietinum
Ca_13537
N
0.984
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.983
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.983
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.982
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.979
TCM_032479
Theobroma cacao
TCM_032479
N
0.970
29650.m000275
Ricinus communis
29650.m000275
N
0.967
Cla023574
Citrullus lanatus
Cla023574
N
0.967
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.958
OMERI03G00460
Oryza meridionalis
OMERI03G00460
N
0.951
MDP0000216357
Malus domestica
MDP0000216357
N
0.948
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.944
GSMUA_Achr9G10210_001
Musa acuminata
GSMUA_Achr9G10210_001
N
0.943
AMTR_s00067p00064350
Amborella trichopoda
AMTR_s00067p00064350
N
0.941
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.939
GSMUA_Achr11G22760_001
Musa acuminata
GSMUA_Achr11G22760_001
N
0.932
GSMUA_AchrUn_randomG17260_001
Musa acuminata
GSMUA_AchrUn_randomG17260_001
N
0.919
VIT_19s0027g00230
Vitis vinifera
VIT_19s0027g00230
N
0.917
GSMUA_Achr3G23360_001
Musa acuminata
GSMUA_Achr3G23360_001
N
0.916
GSMUA_Achr6G30050_001
Musa acuminata
GSMUA_Achr6G30050_001
N
0.911
GSMUA_Achr6G36550_001
Musa acuminata
GSMUA_Achr6G36550_001
N
0.900
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.898
POPTR_0002s15530
Populus trichocarpa
POPTR_0002s15530
N
0.897
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.895
SapurV1A.0024s0360
Salix purpurea
SapurV1A.0024s0360
N
0.882
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.875