29950.m001173 (Ricinus communis)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 29950.m001173 T296772_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB

VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.919 0.830
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN

NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.919 0.830
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD

HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.871 0.750
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA

TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.871 0.750
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29950.m001173 NAC/NAM 9 141

Links

Other NAC/NAM family TFs
Other Ricinus communis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GEBPL Arabidopsis thaliana AT4G25210 N 0.000
Bostr.28243s0011 Boechera stricta Bostr.28243s0011 N 0.000
Bostr.8819s0105 Boechera stricta Bostr.8819s0105 N 0.000
Bo1g039870 Brassica oleracea Bo1g039870 N 0.000
Bo7g110050 Brassica oleracea Bo7g110050 N 0.000
Bra013873 Brassica rapa Bra013873 N 0.000
Bra019183 Brassica rapa Bra019183 N 0.000
Cagra.10726s0005 Capsella grandiflora Cagra.10726s0005 N 0.000