CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30136.m001048
(
Ricinus communis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
30136.m001048
T296798_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30136.m001048
NAC/NAM
6
132
SPGFRFHPTDVELVKYYLKRKVLGKRFHMEAIAEVDIYKYAPWDLPNKSLLRSGDLKWYFFCSREKKYASGFRMKRATEFGYWKTTGKDRPVRYDDQVVGSIKTLVFHQGKAPKGNRTDWVMYEYKL
Links
Other
NAC/NAM
family TFs
Other
Ricinus communis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g036240m.g
Citrus sinensis
orange1.1g036240m.g
N
0.943
Ciclev10001200m.g
Citrus clementina
Ciclev10001200m.g
N
0.943
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
0.934
GSMUA_Achr11G09000_001
Musa acuminata
GSMUA_Achr11G09000_001
N
0.931
PDK_20s1369501g001
Phoenix dactylifera
PDK_20s1369501g001
N
0.924
evm.TU.supercontig_42.145
Carica papaya
evm.TU.supercontig_42.145
I
0.922
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N
0.920
Bo3g101690
Brassica oleracea
Bo3g101690
I
0.917
Bra024263
Brassica rapa
Bra024263
I
0.917
Lus10020896.g
Linum usitatissimum
Lus10020896.g
N
0.916
Thhalv10004501m.g
Eutrema salsugineum
Thhalv10004501m.g
I
0.916
VNI1
Arabidopsis lyrata
fgenesh2_kg.6__879__AT5G09330.2
N
0.912
cassava43226.valid.m1
Manihot esculenta
cassava43226.valid.m1
N
0.909
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
0.909
mgf025137m
Mimulus guttatus
mgf025137m
N
0.908
NAC082
Arabidopsis thaliana
AT5G09330
N
0.908
Solyc11g005920.1
Solanum lycopersicum
Solyc11g005920.1
N
0.906
TCM_028313
Theobroma cacao
TCM_028313
N
0.904
GSMUA_Achr10G04530_001
Musa acuminata
GSMUA_Achr10G04530_001
N
0.900
Carubv10001139m.g
Capsella rubella
Carubv10001139m.g
N
0.895
Cagra.1365s0106
Capsella grandiflora
Cagra.1365s0106
N
0.895
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.894
Eucgr.I00213
Eucalyptus grandis
Eucgr.I00213
N
0.894
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.894
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.894
LjSGA_024981.1
Lotus japonicus
LjSGA_024981.1
N
0.891
Cagra.0248s0087
Capsella grandiflora
Cagra.0248s0087
I
0.888
Carubv10026643m.g
Capsella rubella
Carubv10026643m.g
I
0.888
POPTR_0005s06040
Populus trichocarpa
POPTR_0005s06040
N
0.886
Bostr.0568s0398
Boechera stricta
Bostr.0568s0398
I
0.881
Cla008570
Citrullus lanatus
Cla008570
N
0.881
Bostr.13129s0062
Boechera stricta
Bostr.13129s0062
N
0.880
GSMUA_Achr7G23330_001
Musa acuminata
GSMUA_Achr7G23330_001
N
0.878
gene27615-v1.0-hybrid
Fragaria vesca
gene27615-v1.0-hybrid
N
0.877
LPERR04G26370
Leersia perrieri
LPERR04G26370
N
0.874
BGIOSGA014023
Oryza indica
BGIOSGA014023
N
0.872
OLONG_013985
Oryza longistaminata
OLONG_013985
N
0.872
OPUNC04G28460
Oryza punctata
OPUNC04G28460
N
0.872
ORUFI04G32600
Oryza rufipogon
ORUFI04G32600
N
0.872
OGLUM04G30770
Oryza glumaepatula
OGLUM04G30770
N
0.872
ONIVA04G10650
Oryza nivara
ONIVA04G10650
N
0.872
OMERI04G25580
Oryza meridionalis
OMERI04G25580
N
0.872
LPERR04G20380
Leersia perrieri
LPERR04G20380
N
0.871
GLYMA06G15840
Glycine max
GLYMA06G15840
N
0.871