CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava22173.valid.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava22173.valid.m1
T296856_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.873
0.702
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.873
0.702
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava22173.valid.m1
NAC/NAM
20
146
PPGFRFHPTDEELVLYYLKRKMCKRRLQLDIIRELDVYKWDPEELPGQSVLKTGDRQWFFFSPRDRKYPNGARSNRATGQGYWKATGKDRTIKCNSRNVGLKKTLVFYRGRAPNGERTDWVMHEYTL
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy