cassava35701.valid.m1 (Manihot esculenta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 cassava35701.valid.m1 T296895_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB

VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.923 0.830
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN

NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.923 0.830
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD

HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.876 0.759
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA

TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.876 0.759
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava35701.valid.m1 NAC/NAM 9 145

Links

Other NAC/NAM family TFs
Other Manihot esculenta TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29950.m001173 Ricinus communis 29950.m001173 I 0.954
30078.m002348 Ricinus communis 30078.m002348 I 0.890
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.878
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I 0.922
anac047 Vitis vinifera VIT_08s0007g07670 I 0.932
Bo1g128420 Brassica oleracea Bo1g128420 I 0.881
Bo1g152220 Brassica oleracea Bo1g152220 I 0.920
Bo5g148420 Brassica oleracea Bo5g148420 I 0.902
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.876
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I 0.922
Bra021114 Brassica rapa Bra021114 I 0.881
Bra031949 Brassica rapa Bra031949 I 0.912
Bra040152 Brassica rapa Bra040152 I 0.920
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.888
Cagra.2026s0001 Capsella grandiflora Cagra.2026s0001 I 0.922
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.888
Carubv10014000m.g Capsella rubella Carubv10014000m.g I 0.922
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.944
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.876
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.953
Eucgr.A02070 Eucalyptus grandis Eucgr.A02070 I 0.896
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.888
F775_02308 Aegilops tauschii F775_02308 I 0.877
GLYMA06G38440 Glycine max GLYMA06G38440 I 0.872
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.883
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.887
GLYMA16G26740 Glycine max GLYMA16G26740 I 0.894
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.889
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.934
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I 0.935
GRMZM2G011598 Zea mays GRMZM2G011598 I 0.872
GRMZM2G042494 Zea mays GRMZM2G042494 I 0.887
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.888
Lus10003269.g Linum usitatissimum Lus10003269.g I 0.917
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.922
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.875
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.875
Lus10042531.g Linum usitatissimum Lus10042531.g I 0.946
MDP0000180683 Malus domestica MDP0000180683 I 0.910
MDP0000404409 Malus domestica MDP0000404409 I 0.902
MDP0000674514 Malus domestica MDP0000674514 I 0.879
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.877
NAC018 Arabidopsis thaliana AT1G52880 D 0.876
NAC047 Arabidopsis thaliana AT3G04070 D 0.923
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.871
OB03G25680 Oryza brachyantha OB03G25680 I 0.877
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.886
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.953
PK06287.1 Cannabis sativa PK06287.1 N 0.877
Pm025312 Prunus mume Pm025312 I 0.910
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.944
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.953
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.910
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I 0.935
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.958
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I 0.935
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.958
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.887
TCM_026030 Theobroma cacao TCM_026030 I 0.949
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I 0.917
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.877
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.877
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.877