Cucsa.032500 (Cucumis sativus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cucsa.032500 T296942_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC054
M07205_2.00
Arabidopsis thaliana
CKTVHNNHRCACGYHANCW

WGNTDRCGTGYDNNDBAMG
Dap-seq
OMalley et al.(2016)
CUC1_colamp_a
0.897 0.842
NAC054
M07206_2.00
Arabidopsis thaliana
TWNCKTGHNNNDCAMG

CKTGHNNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
CUC1_col_v31
0.897 0.842
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.032500.1 NAC/NAM 15 141

Links

Other NAC/NAM family TFs
Other Cucumis sativus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla004358 Citrullus lanatus Cla004358 I 0.970
Cucsa.158180 Cucumis sativus Cucsa.158180 I 0.924
GLYMA13G34950 Glycine max GLYMA13G34950 I 0.903
GLYMA12G35530 Glycine max GLYMA12G35530 I 0.903
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I 0.898
NAC054 Arabidopsis thaliana AT3G15170 D 0.897
Carubv10014276m.g Capsella rubella Carubv10014276m.g I 0.897
Bo3g066690 Brassica oleracea Bo3g066690 I 0.897
CUC1 Arabidopsis lyrata fgenesh2_kg.3__1650__AT3G15170.1 I 0.897
Cagra.0007s0060 Capsella grandiflora Cagra.0007s0060 I 0.897
Bostr.28625s0180 Boechera stricta Bostr.28625s0180 I 0.897
Thhalv10021186m.g Eutrema salsugineum Thhalv10021186m.g I 0.897
Bra001586 Brassica rapa Bra001586 I 0.897
Bra021592 Brassica rapa Bra021592 I 0.896
Bo1g129730 Brassica oleracea Bo1g129730 I 0.896
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I 0.894
GLYMA06G35660 Glycine max GLYMA06G35660 I 0.893
Ca_22532 Cicer arietinum Ca_22532 I 0.893
MTR_2g078700 Medicago truncatula MTR_2g078700 I 0.893
GLYMA12G26190 Glycine max GLYMA12G26190 I 0.893
Cla023717 Citrullus lanatus Cla023717 I 0.892
Cucsa.122890 Cucumis sativus Cucsa.122890 I 0.891
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I 0.886
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I 0.885
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I 0.883
TCM_018621 Theobroma cacao TCM_018621 I 0.882
mgf003818m Mimulus guttatus mgf003818m I 0.881
VIT_14s0108g01070 Vitis vinifera VIT_14s0108g01070 I 0.877
POPTR_0001s40680 Populus trichocarpa POPTR_0001s40680 I 0.873
SapurV1A.0207s0120 Salix purpurea SapurV1A.0207s0120 I 0.873