CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.077390
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.077390
T296952_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.077390.1
NAC/NAM
37
164
PPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRL
Cucsa.077390.2
NAC/NAM
37
164
PPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRL
Cucsa.077390.3
NAC/NAM
37
164
PPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla022250
Citrullus lanatus
Cla022250
N
0.997
mgf009162m
Mimulus guttatus
mgf009162m
N
0.976
Lus10013964.g
Linum usitatissimum
Lus10013964.g
N
0.900
Pm022916
Prunus mume
Pm022916
I
0.897
PRUPE_ppa022238mg
Prunus persica
PRUPE_ppa022238mg
I
0.889
Eucgr.F03588
Eucalyptus grandis
Eucgr.F03588
I
0.888
Cucsa.352340
Cucumis sativus
Cucsa.352340
N
0.887
Thhalv10019493m.g
Eutrema salsugineum
Thhalv10019493m.g
I
0.885
evm.TU.supercontig_286.12
Carica papaya
evm.TU.supercontig_286.12
I
0.884
Bra008259
Brassica rapa
Bra008259
I
0.883
Bo6g120460
Brassica oleracea
Bo6g120460
I
0.883
Bo2g089890
Brassica oleracea
Bo2g089890
I
0.883
Bra015750
Brassica rapa
Bra015750
I
0.883
SapurV1A.0016s0340
Salix purpurea
SapurV1A.0016s0340
I
0.881
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
0.880
27950.m000105
Ricinus communis
27950.m000105
I
0.880
TCM_031619
Theobroma cacao
TCM_031619
I
0.880
POPTR_0002s00730
Populus trichocarpa
POPTR_0002s00730
I
0.880
mgf023466m
Mimulus guttatus
mgf023466m
I
0.880
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
0.880
orange1.1g016283m.g
Citrus sinensis
orange1.1g016283m.g
I
0.878
Ciclev10001403m.g
Citrus clementina
Ciclev10001403m.g
I
0.878
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
0.878
LPERR06G12840
Leersia perrieri
LPERR06G12840
I
0.878
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
0.878
Bostr.20129s0079
Boechera stricta
Bostr.20129s0079
I
0.876
cassava21580.m1
Manihot esculenta
cassava21580.m1
I
0.876
BGIOSGA022861
Oryza indica
BGIOSGA022861
I
0.876
30170.m014236
Ricinus communis
30170.m014236
I
0.876
TCM_034835
Theobroma cacao
TCM_034835
I
0.876
OGLUM06G14810
Oryza glumaepatula
OGLUM06G14810
I
0.876
OLONG_019251
Oryza longistaminata
OLONG_019251
I
0.876
ONIVA03G33370
Oryza nivara
ONIVA03G33370
I
0.876
OBART06G13940
Oryza barthii
OBART06G13940
I
0.876
OB06G22100
Oryza brachyantha
OB06G22100
I
0.876
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
0.876
SapurV1A.0266s0070
Salix purpurea
SapurV1A.0266s0070
I
0.876
OPUNC06G13130
Oryza punctata
OPUNC06G13130
I
0.876
ORGLA06G0124600
Oryza glaberrima
ORGLA06G0124600
I
0.876
CUC3
Vitis vinifera
VIT_18s0122g00800
I
0.876
OS06G0344900
Oryza sativa
OS06G0344900
I
0.876
POPTR_0005s27720
Populus trichocarpa
POPTR_0005s27720
I
0.876
ORUFI06G14810
Oryza rufipogon
ORUFI06G14810
I
0.876
MDP0000191344
Malus domestica
MDP0000191344
I
0.875
MDP0000310981
Malus domestica
MDP0000310981
I
0.875
MDP0000167208
Malus domestica
MDP0000167208
I
0.875
Pm011397
Prunus mume
Pm011397
I
0.875
VIT_19s0014g02200
Vitis vinifera
VIT_19s0014g02200
I
0.875
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
0.875
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
0.875
Cucsa.122890
Cucumis sativus
Cucsa.122890
I
0.874
Cla023717
Citrullus lanatus
Cla023717
I
0.874
MTR_2g078700
Medicago truncatula
MTR_2g078700
I
0.873
Cla023834
Citrullus lanatus
Cla023834
I
0.873
Gorai.013G171300
Gossypium raimondii
Gorai.013G171300
I
0.873
gene31474-v1.0-hybrid
Fragaria vesca
gene31474-v1.0-hybrid
I
0.873
Cucsa.272370
Cucumis sativus
Cucsa.272370
I
0.873
GSMUA_Achr9G20090_001
Musa acuminata
GSMUA_Achr9G20090_001
I
0.872
LjSGA_071377.1
Lotus japonicus
LjSGA_071377.1
I
0.871
Ca_22532
Cicer arietinum
Ca_22532
I
0.871
MDP0000135860
Malus domestica
MDP0000135860
I
0.871