CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.273280
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.273280
T297002_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.273280.1
NAC/NAM
10
136
PLGFRFRPTDEELIDYYLRSKINGNHEDVSVIREVDVCKWEPWDLPDLSIIKTKDPEWFFFCPQDRKYPNGHRLKRATVAGYWKATGKDRKIKSGTKLIGMKKTLVFYKGRAPKGKRTNWVVHEYRA
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla002432
Citrullus lanatus
Cla002432
N
0.969
gene12442-v1.0-hybrid
Fragaria vesca
gene12442-v1.0-hybrid
N
0.941
MTR_3g093040
Medicago truncatula
MTR_3g093040
N
0.933
GLYMA02G38710
Glycine max
GLYMA02G38710
N
0.933
orange1.1g007393m.g
Citrus sinensis
orange1.1g007393m.g
N
0.930
Ciclev10019368m.g
Citrus clementina
Ciclev10019368m.g
N
0.930
cassava11768.valid.m1
Manihot esculenta
cassava11768.valid.m1
N
0.918
VIT_16s0098g00760
Vitis vinifera
VIT_16s0098g00760
I
0.915
29764.m000758
Ricinus communis
29764.m000758
N
0.912
GLYMA04G40450
Glycine max
GLYMA04G40450
N
0.907
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.906
PK15363.1
Cannabis sativa
PK15363.1
N
0.901
SapurV1A.0326s0320
Salix purpurea
SapurV1A.0326s0320
N
0.900
Ca_27204
Cicer arietinum
Ca_27204
I
0.900
Eucgr.E01095
Eucalyptus grandis
Eucgr.E01095
I
0.897
GLYMA06G14290
Glycine max
GLYMA06G14290
N
0.895
evm.TU.supercontig_37.112
Carica papaya
evm.TU.supercontig_37.112
I
0.891
TCM_015584
Theobroma cacao
TCM_015584
I
0.889
MTR_3g093050
Medicago truncatula
MTR_3g093050
I
0.888
Pm019659
Prunus mume
Pm019659
I
0.888
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.888
Ca_04069
Cicer arietinum
Ca_04069
I
0.886
VIT_02s0025g03020
Vitis vinifera
VIT_02s0025g03020
I
0.886
POPTR_0015s00640
Populus trichocarpa
POPTR_0015s00640
N
0.885
POPTR_0012s00760
Populus trichocarpa
POPTR_0012s00760
N
0.884
MDP0000266908
Malus domestica
MDP0000266908
I
0.884
Lus10008285.g
Linum usitatissimum
Lus10008285.g
I
0.883
Lus10033251.g
Linum usitatissimum
Lus10033251.g
I
0.883
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.882
POPTR_0011s15230
Populus trichocarpa
POPTR_0011s15230
I
0.882
SapurV1A.0666s0060
Salix purpurea
SapurV1A.0666s0060
N
0.881
chr1.LjT41E18.160.nc
Lotus japonicus
chr1.LjT41E18.160.nc
I
0.879
Pm029581
Prunus mume
Pm029581
I
0.879
PRUPE_ppa001291mg
Prunus persica
PRUPE_ppa001291mg
I
0.879
Gorai.008G261400
Gossypium raimondii
Gorai.008G261400
I
0.879
PK02019.1
Cannabis sativa
PK02019.1
I
0.873
30068.m002619
Ricinus communis
30068.m002619
I
0.872
POPTR_0001s45700
Populus trichocarpa
POPTR_0001s45700
I
0.871