CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.313350
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.313350
T297010_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac071
M07219_2.00
Arabidopsis thaliana
CTTSHNNYHCAMGYW
WRCKTGDRNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_col_a
0.934
0.861
anac071
M07220_2.00
Arabidopsis thaliana
CTTSHNNNNSAMGYA
TRCKTSNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a
0.934
0.861
anac096
M07237_2.00
Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC
GRTTDCKTVNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a
0.932
0.815
anac096
M07238_2.00
Arabidopsis thaliana
TTNCTTSWNNHNYAMG
CKTRNDNNWSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC096_col
0.932
0.815
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.880
0.769
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.880
0.769
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.313350.1
NAC/NAM
7
133
PPGFRFHPTDEELVGYYLKRKVEGLPIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKINCQSSVMGYRKTLVFYRGRAPLGDRMDWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla016424
Citrullus lanatus
Cla016424
I
0.968
cassava22941.valid.m1
Manihot esculenta
cassava22941.valid.m1
I
0.966
POPTR_0003s08830
Populus trichocarpa
POPTR_0003s08830
I
0.966
MDP0000936269
Malus domestica
MDP0000936269
I
0.965
gene10722-v1.0-hybrid
Fragaria vesca
gene10722-v1.0-hybrid
I
0.965
SapurV1A.0846s0080
Salix purpurea
SapurV1A.0846s0080
I
0.965
Pm023277
Prunus mume
Pm023277
I
0.962
PRUPE_ppa007828mg
Prunus persica
PRUPE_ppa007828mg
I
0.962
orange1.1g018835m.g
Citrus sinensis
orange1.1g018835m.g
I
0.962
Ciclev10031966m.g
Citrus clementina
Ciclev10031966m.g
I
0.962
Lus10035373.g
Linum usitatissimum
Lus10035373.g
I
0.962
PK00339.1
Cannabis sativa
PK00339.1
I
0.961
29827.m002555
Ricinus communis
29827.m002555
I
0.961
Lus10030978.g
Linum usitatissimum
Lus10030978.g
I
0.961
POPTR_0001s02710
Populus trichocarpa
POPTR_0001s02710
I
0.960
MTR_5g014300
Medicago truncatula
MTR_5g014300
I
0.959
Eucgr.D02182
Eucalyptus grandis
Eucgr.D02182
I
0.956
VIT_02s0012g01040
Vitis vinifera
VIT_02s0012g01040
I
0.955
Gorai.008G227800
Gossypium raimondii
Gorai.008G227800
I
0.955
SapurV1A.0900s0060
Salix purpurea
SapurV1A.0900s0060
I
0.954
Gorai.004G186700
Gossypium raimondii
Gorai.004G186700
I
0.954
Solyc08g077110.2
Solanum lycopersicum
Solyc08g077110.2
I
0.954
GLYMA05G23840
Glycine max
GLYMA05G23840
I
0.954
Cagra.3356s0092
Capsella grandiflora
Cagra.3356s0092
I
0.952
GLYMA17G16500
Glycine max
GLYMA17G16500
I
0.952
evm.TU.supercontig_90.52
Carica papaya
evm.TU.supercontig_90.52
I
0.951
Eucgr.E00298
Eucalyptus grandis
Eucgr.E00298
I
0.951
PGSC0003DMG400017505
Solanum tuberosum
PGSC0003DMG400017505
I
0.949
anac096
Arabidopsis lyrata
fgenesh2_kg.8__135__AT5G46590.1
I
0.947
Ca_02274
Cicer arietinum
Ca_02274
I
0.947
Ca_12837
Cicer arietinum
Ca_12837
I
0.946
OB10G26350
Oryza brachyantha
OB10G26350
I
0.945
Carubv10028284m.g
Capsella rubella
Carubv10028284m.g
I
0.944
ORGLA10G0144100
Oryza glaberrima
ORGLA10G0144100
I
0.944
Cagra.0569s0030
Capsella grandiflora
Cagra.0569s0030
I
0.944
ORUFI10G20470
Oryza rufipogon
ORUFI10G20470
I
0.944
OBART10G19230
Oryza barthii
OBART10G19230
I
0.944
OPUNC10G17630
Oryza punctata
OPUNC10G17630
I
0.944
OGLUM10G19330
Oryza glumaepatula
OGLUM10G19330
I
0.944
BGIOSGA033482
Oryza indica
BGIOSGA033482
I
0.944
OLONG_018722
Oryza longistaminata
OLONG_018722
I
0.944
ONIVA10G21790
Oryza nivara
ONIVA10G21790
I
0.944
OMERI07G08100
Oryza meridionalis
OMERI07G08100
I
0.944
BRADI3G33957
Brachypodium distachyon
BRADI3G33957
I
0.943
TCM_015749
Theobroma cacao
TCM_015749
I
0.943
Bra025012
Brassica rapa
Bra025012
I
0.942
Gorai.007G031300
Gossypium raimondii
Gorai.007G031300
I
0.942
Thhalv10001200m.g
Eutrema salsugineum
Thhalv10001200m.g
I
0.942
LPERR10G15090
Leersia perrieri
LPERR10G15090
I
0.942
Bo7g075540
Brassica oleracea
Bo7g075540
I
0.942
Carubv10007390m.g
Capsella rubella
Carubv10007390m.g
I
0.942
anac071
Arabidopsis lyrata
Al_scaffold_0007_2395
I
0.941
Pavir.Ia03491
Panicum virgatum
Pavir.Ia03491
I
0.941
Bra022046
Brassica rapa
Bra022046
I
0.941
Sb01g028450
Sorghum bicolor
Sb01g028450
I
0.941
Si036301m.g
Setaria italica
Si036301m.g
I
0.941
Bostr.30275s0267
Boechera stricta
Bostr.30275s0267
I
0.940
GSMUA_Achr5G03360_001
Musa acuminata
GSMUA_Achr5G03360_001
I
0.940
Gorai.003G180600
Gossypium raimondii
Gorai.003G180600
I
0.939
GRMZM2G082709
Zea mays
GRMZM2G082709
I
0.938
Traes_1BL_8925B27BC
Triticum aestivum
Traes_1BL_8925B27BC
I
0.935
MLOC_58950
Hordeum vulgare
MLOC_58950
I
0.935
F775_28577
Aegilops tauschii
F775_28577
I
0.935
Traes_1AL_D6C49C3BC
Triticum aestivum
Traes_1AL_D6C49C3BC
I
0.935
Bra012626
Brassica rapa
Bra012626
I
0.934
anac071
Arabidopsis thaliana
AT4G17980
D
0.934
anac096
Arabidopsis thaliana
AT5G46590
D
0.932
Bo1g019130
Brassica oleracea
Bo1g019130
I
0.931
Bra013272
Brassica rapa
Bra013272
I
0.931
Bo7g105630
Brassica oleracea
Bo7g105630
I
0.930
Bo2g130240
Brassica oleracea
Bo2g130240
I
0.930
AMTR_s00149p00068500
Amborella trichopoda
AMTR_s00149p00068500
I
0.927
Pavir.Ib02435
Panicum virgatum
Pavir.Ib02435
I
0.927
TRIUR3_22131
Triticum urartu
TRIUR3_22131
I
0.923
chr2.CM0021.650.nc
Lotus japonicus
chr2.CM0021.650.nc
I
0.922
MDP0000119446
Malus domestica
MDP0000119446
I
0.922
Solyc06g061080.2
Solanum lycopersicum
Solyc06g061080.2
I
0.920
MTR_4g098630
Medicago truncatula
MTR_4g098630
I
0.911
Thhalv10027064m.g
Eutrema salsugineum
Thhalv10027064m.g
I
0.906
Aquca_044_00122
Aquilegia coerulea
Aquca_044_00122
I
0.905
Bostr.4485s0006
Boechera stricta
Bostr.4485s0006
I
0.903
GSMUA_Achr11G17780_001
Musa acuminata
GSMUA_Achr11G17780_001
I
0.903
mgf019012m
Mimulus guttatus
mgf019012m
I
0.898
anac028
Arabidopsis lyrata
Al_scaffold_0002_1137
I
0.880
anac028
Arabidopsis thaliana
AT1G65910
D
0.880
Thhalv10018275m.g
Eutrema salsugineum
Thhalv10018275m.g
I
0.872
Traes_1DL_A556D8590
Triticum aestivum
Traes_1DL_A556D8590
N
0.872
Bo2g052630
Brassica oleracea
Bo2g052630
I
0.872
Carubv10021788m.g
Capsella rubella
Carubv10021788m.g
I
0.872
Cagra.11446s0003
Capsella grandiflora
Cagra.11446s0003
I
0.872
Bra039745
Brassica rapa
Bra039745
I
0.872
Bostr.26959s0323
Boechera stricta
Bostr.26959s0323
I
0.872