CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.319840
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.319840
T297012_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC011
M07169_2.00
Arabidopsis thaliana
RTTDCTTSNNHNDCAAGHWAY
RTWDCTTGHNDNNSAAGHAAY
Dap-seq
OMalley et al.(2016)
ANAC011_col_a
0.875
0.491
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.319840.1
NAC/NAM
16
146
PPGFRFYPTEEELVSFYLPHQLQTQLPEKHRVIPLLNIYDFDPWDLPKLAGELCKGDNEQWFFFVPRQEREARGGRPSRTTAAGYWKATGSPVYVYSSASKVIGLKKTMVFYKGRAPTGTKTKWKMHEYRA
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
140 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy