e_gw1.159.34.1 (Physcomitrella patens)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 e_gw1.159.34.1 T297028_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.159.34.1
M02379_2.00		 Physcomitrella patens
DYACGNHANN
NNTDNCGTRH		 PBM
Weirauch et al.(2014)
pTH8477		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.327.11.1
M02382_2.00 		Physcomitrella patens
NTTDYRTWWN
NWWAYRHAAN		 PBM
Weirauch et al.(2014)
pTH8478 		0.925 0.825
e_gw1.288.15.1
M02381_2.00 		Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN		 PBM
Weirauch et al.(2014)
pTH8467 		0.909 0.789
NAC079
M02373_2.00 		Arabidopsis thaliana
TTGCGTRY
RYACGCAA		 PBM
Weirauch et al.(2014)
pTH7399 		0.895 0.754
NAC079
M07228_2.00 		Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG		 Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a 		0.895 0.754
NAC079
M07229_2.00 		Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN		 Dap-seq
OMalley et al.(2016)
ANAC079_col 		0.895 0.754
ANAC080
M02376_2.00 		Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH9230 		0.893 0.746
NAC92
M00979_2.00 		Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN		 PBM
Lindemose et al.(2014)
ANAC092 		0.889 0.772
NAC92
M00730_2.00 		Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH		 PBM
Chang et al.(2013)
pTH7335 		0.889 0.772
NAC92
M07234_2.00 		Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a 		0.889 0.772
NAC92
M07235_2.00 		Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW		 Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a 		0.889 0.772
NAC098
M07239_2.00 		Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC2_colamp_a 		0.887 0.763
NAC098
M07240_2.00 		Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN		 Dap-seq
OMalley et al.(2016)
CUC2_col 		0.887 0.763
NAC100
M02375_2.00 		Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH7239 		0.886 0.754
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.883 0.763
ANAC100
M02377_2.00 		Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH		 PBM
Weirauch et al.(2014)
pTH9234 		0.882 0.754
For this family, TFs with SR scores > 0.870 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02379_2.00 NAC/NAM 9 135

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.159.34.1 NAC/NAM 9 135

Links

Other NAC/NAM family TFs
Other Physcomitrella patens TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.327.11.1 Physcomitrella patens e_gw1.327.11.1 D 0.925
e_gw1.227.43.1 Physcomitrella patens e_gw1.227.43.1 I 0.919
estExt_gwp_gw1.C_460173 Physcomitrella patens estExt_gwp_gw1.C_460173 I 0.910
e_gw1.288.15.1 Physcomitrella patens e_gw1.288.15.1 D 0.909
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I 0.906
OPUNC02G19580 Oryza punctata OPUNC02G19580 I 0.904
GLYMA06G21020 Glycine max GLYMA06G21020 I 0.902
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I 0.901
Eucgr.B00529 Eucalyptus grandis Eucgr.B00529 I 0.901
GLYMA04G33270 Glycine max GLYMA04G33270 I 0.900
GLYMA17G10970 Glycine max GLYMA17G10970 I 0.900
GLYMA05G00930 Glycine max GLYMA05G00930 I 0.900
Bostr.13129s0198 Boechera stricta Bostr.13129s0198 I 0.896
Bra028685 Brassica rapa Bra028685 I 0.896
Aquca_002_00662 Aquilegia coerulea Aquca_002_00662 I 0.896
Cagra.2925s0018 Capsella grandiflora Cagra.2925s0018 I 0.895
Carubv10001372m.g Capsella rubella Carubv10001372m.g I 0.895
NAC079 Arabidopsis thaliana AT5G07680 D 0.895
Thhalv10014081m.g Eutrema salsugineum Thhalv10014081m.g I 0.895
Lus10041924.g Linum usitatissimum Lus10041924.g I 0.894
Lus10005537.g Linum usitatissimum Lus10005537.g I 0.894
PK13860.1 Cannabis sativa PK13860.1 I 0.894
ANAC080 Arabidopsis lyrata fgenesh2_kg.6__736__AT5G07680.1 D 0.893
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I 0.893
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I 0.893
27950.m000105 Ricinus communis 27950.m000105 I 0.893
TCM_031619 Theobroma cacao TCM_031619 I 0.893
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I 0.893
Bra009246 Brassica rapa Bra009246 I 0.893
evm.TU.supercontig_111.22 Carica papaya evm.TU.supercontig_111.22 I 0.892
Pm011397 Prunus mume Pm011397 I 0.892
cassava1758.valid.m1 Manihot esculenta cassava1758.valid.m1 I 0.892
cassava44869.m1 Manihot esculenta cassava44869.m1 I 0.892
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I 0.892
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I 0.892
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I 0.892
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I 0.892
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I 0.892
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I 0.892
MDP0000310981 Malus domestica MDP0000310981 I 0.892
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I 0.892
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I 0.892
Bo9g113820 Brassica oleracea Bo9g113820 I 0.892
Gorai.007G079900 Gossypium raimondii Gorai.007G079900 I 0.892
Bo00578s090 Brassica oleracea Bo00578s090 I 0.891
SELMODRAFT_77371 Selaginella moellendorffii SELMODRAFT_77371 I 0.891
OLONG_019251 Oryza longistaminata OLONG_019251 I 0.891
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I 0.891
MDP0000135860 Malus domestica MDP0000135860 I 0.891
OS06G0344900 Oryza sativa OS06G0344900 I 0.891
ONIVA03G33370 Oryza nivara ONIVA03G33370 I 0.891
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I 0.891
TCM_014073 Theobroma cacao TCM_014073 I 0.891
Bra025658 Brassica rapa Bra025658 I 0.891
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I 0.891
OPUNC06G13130 Oryza punctata OPUNC06G13130 I 0.891
OBART06G13940 Oryza barthii OBART06G13940 I 0.891
Cla019391 Citrullus lanatus Cla019391 I 0.891
BGIOSGA022861 Oryza indica BGIOSGA022861 I 0.891
OB06G22100 Oryza brachyantha OB06G22100 I 0.891
LPERR06G12840 Leersia perrieri LPERR06G12840 I 0.891
GSMUA_Achr8G24680_001 Musa acuminata GSMUA_Achr8G24680_001 I 0.891
Pm024887 Prunus mume Pm024887 I 0.890
ATNAC2 Arabidopsis lyrata fgenesh2_kg.7__3461__AT5G39610.1 I 0.889
Bostr.10058s0039 Boechera stricta Bostr.10058s0039 I 0.889
Gorai.008G194400 Gossypium raimondii Gorai.008G194400 I 0.889
NAC92 Arabidopsis thaliana AT5G39610 D 0.889
MTR_2g078700 Medicago truncatula MTR_2g078700 I 0.889
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I 0.889
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I 0.889
Bo6g062160 Brassica oleracea Bo6g062160 I 0.888
SELMODRAFT_95019 Selaginella moellendorffii SELMODRAFT_95019 I 0.888
28649.m000212 Ricinus communis 28649.m000212 I 0.888
Cucsa.197830 Cucumis sativus Cucsa.197830 I 0.888
Thhalv10004550m.g Eutrema salsugineum Thhalv10004550m.g I 0.888
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I 0.888
F775_20638 Aegilops tauschii F775_20638 I 0.888
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I 0.888
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I 0.887
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I 0.887
Carubv10028330m.g Capsella rubella Carubv10028330m.g I 0.887
Ca_22532 Cicer arietinum Ca_22532 I 0.887
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I 0.887
NAC098 Arabidopsis thaliana AT5G53950 D 0.887
cassava361.valid.m1 Manihot esculenta cassava361.valid.m1 I 0.886
NAC100 Arabidopsis thaliana AT5G61430 D 0.886
Cla023717 Citrullus lanatus Cla023717 I 0.885
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I 0.885
TCM_018621 Theobroma cacao TCM_018621 I 0.884
cassava1757.valid.m1 Manihot esculenta cassava1757.valid.m1 I 0.884
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I 0.884
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I 0.884
Cucsa.122890 Cucumis sativus Cucsa.122890 I 0.884
Bra028435 Brassica rapa Bra028435 I 0.884
Bo2g008760 Brassica oleracea Bo2g008760 I 0.884
Thhalv10027874m.g Eutrema salsugineum Thhalv10027874m.g I 0.884
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I 0.883
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I 0.883
NAC59 Arabidopsis thaliana AT3G29035 D 0.883
ATNAC3 Arabidopsis lyrata fgenesh2_kg.5__665__AT3G29035.1 I 0.883
Cla017258 Citrullus lanatus Cla017258 I 0.883
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I 0.883
Carubv10026752m.g Capsella rubella Carubv10026752m.g I 0.882
Cagra.0542s0037 Capsella grandiflora Cagra.0542s0037 I 0.882
Bo7g098620 Brassica oleracea Bo7g098620 I 0.882
Bra012960 Brassica rapa Bra012960 I 0.882
Bra029313 Brassica rapa Bra029313 I 0.882
ANAC100 Arabidopsis lyrata fgenesh2_kg.8__2118__AT5G61430.1 D 0.882
PDK_20s1323531g003 Phoenix dactylifera PDK_20s1323531g003 I 0.881
GRMZM2G386163 Zea mays GRMZM2G386163 I 0.881
GLYMA06G35660 Glycine max GLYMA06G35660 I 0.880
Pm015914 Prunus mume Pm015914 I 0.880
GLYMA12G26190 Glycine max GLYMA12G26190 I 0.880
PK26741.1 Cannabis sativa PK26741.1 I 0.880
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I 0.879
OPUNC09G13640 Oryza punctata OPUNC09G13640 I 0.879
OLONG_009674 Oryza longistaminata OLONG_009674 I 0.879
OMERI07G04410 Oryza meridionalis OMERI07G04410 I 0.879
Pavir.J02772 Panicum virgatum Pavir.J02772 I 0.879
OBART09G15220 Oryza barthii OBART09G15220 I 0.879
OB04G22290 Oryza brachyantha OB04G22290 I 0.879
BGIOSGA029508 Oryza indica BGIOSGA029508 I 0.879
LPERR09G11330 Leersia perrieri LPERR09G11330 I 0.879
ONIVA09G15800 Oryza nivara ONIVA09G15800 I 0.879
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I 0.879
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I 0.879
OS09G0497900 Oryza sativa OS09G0497900 I 0.879
Si030187m.g Setaria italica Si030187m.g I 0.879
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I 0.879
Sb02g028870 Sorghum bicolor Sb02g028870 I 0.879
MTR_3g435150 Medicago truncatula MTR_3g435150 I 0.878
Bra022685 Brassica rapa Bra022685 I 0.878
VIT_14s0108g01070 Vitis vinifera VIT_14s0108g01070 I 0.878
Bo2g043280 Brassica oleracea Bo2g043280 I 0.878
mgf003818m Mimulus guttatus mgf003818m I 0.878
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I 0.878
POPTR_0001s40680 Populus trichocarpa POPTR_0001s40680 I 0.877
SapurV1A.0207s0120 Salix purpurea SapurV1A.0207s0120 I 0.877
Pavir.J23199 Panicum virgatum Pavir.J23199 I 0.877
Gorai.007G038100 Gossypium raimondii Gorai.007G038100 I 0.876
Thhalv10004583m.g Eutrema salsugineum Thhalv10004583m.g I 0.876
LPERR03G21900 Leersia perrieri LPERR03G21900 I 0.875
Bo2g161570 Brassica oleracea Bo2g161570 I 0.874
OB09G21720 Oryza brachyantha OB09G21720 I 0.874
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I 0.873
OS03G0624600 Oryza sativa OS03G0624600 I 0.873
ONIVA03G27500 Oryza nivara ONIVA03G27500 I 0.873
BRADI4G34157 Brachypodium distachyon BRADI4G34157 I 0.873
OMERI03G23890 Oryza meridionalis OMERI03G23890 I 0.873
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I 0.873
OBART03G26480 Oryza barthii OBART03G26480 I 0.873
OPUNC04G12870 Oryza punctata OPUNC04G12870 I 0.873
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I 0.873
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I 0.873
BGIOSGA013151 Oryza indica BGIOSGA013151 I 0.873
OBART02G21850 Oryza barthii OBART02G21850 I 0.872
BRADI5G12407 Brachypodium distachyon BRADI5G12407 I 0.872
BGIOSGA008492 Oryza indica BGIOSGA008492 I 0.872
OGLUM02G22030 Oryza glumaepatula OGLUM02G22030 I 0.872
ORUFI02G22930 Oryza rufipogon ORUFI02G22930 I 0.872
OS02G0579000 Oryza sativa OS02G0579000 I 0.872
OMERI02G21390 Oryza meridionalis OMERI02G21390 I 0.872
ONIVA02G24080 Oryza nivara ONIVA02G24080 I 0.872
GLYMA12G35530 Glycine max GLYMA12G35530 I 0.871
Bo1g117610 Brassica oleracea Bo1g117610 I 0.871
Bostr.26833s0095 Boechera stricta Bostr.26833s0095 I 0.871
Bra037585 Brassica rapa Bra037585 I 0.871
GLYMA13G34950 Glycine max GLYMA13G34950 I 0.871
Bo9g008770 Brassica oleracea Bo9g008770 I 0.870