e_gw1.201.156.1 (Physcomitrella patens)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 e_gw1.201.156.1 T297033_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.876 0.693
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.876 0.693
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.201.156.1 NAC/NAM 9 141

Links

Other NAC/NAM family TFs
Other Physcomitrella patens TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_gwp_gw1.C_2230002 Physcomitrella patens estExt_gwp_gw1.C_2230002 N 0.959
e_gw1.161.49.1 Physcomitrella patens e_gw1.161.49.1 I 0.944
ORGLA04G0171200 Oryza glaberrima ORGLA04G0171200 I 0.930
OMERI03G30800 Oryza meridionalis OMERI03G30800 I 0.930
OGLUM04G19900 Oryza glumaepatula OGLUM04G19900 I 0.930
OPUNC04G17680 Oryza punctata OPUNC04G17680 I 0.930
OS04G0536500 Oryza sativa OS04G0536500 I 0.930
OBART04G20020 Oryza barthii OBART04G20020 I 0.930
LPERR04G16200 Leersia perrieri LPERR04G16200 I 0.930
ORUFI04G21580 Oryza rufipogon ORUFI04G21580 I 0.930
OB04G27030 Oryza brachyantha OB04G27030 I 0.930
BGIOSGA014649 Oryza indica BGIOSGA014649 I 0.930
Si010504m.g Setaria italica Si010504m.g I 0.930
Pavir.J07126 Panicum virgatum Pavir.J07126 I 0.930
ONIVA04G18230 Oryza nivara ONIVA04G18230 I 0.930
Pavir.Gb00744 Panicum virgatum Pavir.Gb00744 I 0.930
Sb10g000460 Sorghum bicolor Sb10g000460 I 0.927
Pavir.Da02426 Panicum virgatum Pavir.Da02426 I 0.927
Pavir.J26987 Panicum virgatum Pavir.J26987 I 0.927
GSMUA_Achr11G17510_001 Musa acuminata GSMUA_Achr11G17510_001 I 0.925
GRMZM2G041668 Zea mays GRMZM2G041668 I 0.924
GRMZM2G440219 Zea mays GRMZM2G440219 I 0.924
Si006829m.g Setaria italica Si006829m.g I 0.924
e_gw1.70.85.1 Physcomitrella patens e_gw1.70.85.1 N 0.922
Gorai.003G169000 Gossypium raimondii Gorai.003G169000 I 0.921
ORUFI06G00250 Oryza rufipogon ORUFI06G00250 I 0.919
OB06G10310 Oryza brachyantha OB06G10310 I 0.919
OGLUM06G00210 Oryza glumaepatula OGLUM06G00210 I 0.919
BGIOSGA022108 Oryza indica BGIOSGA022108 I 0.919
ONIVA06G00260 Oryza nivara ONIVA06G00260 I 0.919
OPUNC06G00220 Oryza punctata OPUNC06G00220 I 0.919
OMERI06G00230 Oryza meridionalis OMERI06G00230 I 0.919
OBART06G00240 Oryza barthii OBART06G00240 I 0.919
ORGLA06G0002300 Oryza glaberrima ORGLA06G0002300 I 0.919
OS06G0104200 Oryza sativa OS06G0104200 I 0.919
GSMUA_Achr7G06640_001 Musa acuminata GSMUA_Achr7G06640_001 I 0.918
GSMUA_Achr8G11590_001 Musa acuminata GSMUA_Achr8G11590_001 I 0.917
F775_07224 Aegilops tauschii F775_07224 I 0.914
MLOC_53086 Hordeum vulgare MLOC_53086 I 0.914
TRIUR3_08851 Triticum urartu TRIUR3_08851 I 0.914
BRADI1G52187 Brachypodium distachyon BRADI1G52187 I 0.914
Traes_7AS_6398221B7 Triticum aestivum Traes_7AS_6398221B7 I 0.914
Traes_7DS_7F0AF83B0 Triticum aestivum Traes_7DS_7F0AF83B0 I 0.914
Traes_4AL_F853C8660 Triticum aestivum Traes_4AL_F853C8660 I 0.914
GRMZM2G178998 Zea mays GRMZM2G178998 I 0.911
Gorai.004G201100 Gossypium raimondii Gorai.004G201100 I 0.910
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I 0.908
LPERR06G00240 Leersia perrieri LPERR06G00240 I 0.908
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.903
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.903
Bostr.22157s0066 Boechera stricta Bostr.22157s0066 I 0.901
Carubv10022351m.g Capsella rubella Carubv10022351m.g I 0.901
Cagra.1670s0031 Capsella grandiflora Cagra.1670s0031 I 0.901
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.901
MLOC_56103 Hordeum vulgare MLOC_56103 I 0.900
GRMZM2G354151 Zea mays GRMZM2G354151 I 0.900
VND5 Arabidopsis lyrata fgenesh2_kg.2__212__AT1G62700.1 I 0.900
ORUFI02G27110 Oryza rufipogon ORUFI02G27110 I 0.899
OS02G0643600 Oryza sativa OS02G0643600 I 0.899
OBART02G25700 Oryza barthii OBART02G25700 I 0.899
OB02G33070 Oryza brachyantha OB02G33070 I 0.899
LPERR02G21010 Leersia perrieri LPERR02G21010 I 0.899
OMERI02G25220 Oryza meridionalis OMERI02G25220 I 0.899
OGLUM02G26220 Oryza glumaepatula OGLUM02G26220 I 0.899
ONIVA02G28150 Oryza nivara ONIVA02G28150 I 0.899
Sb06g023780 Sorghum bicolor Sb06g023780 I 0.898
GSMUA_Achr11G03780_001 Musa acuminata GSMUA_Achr11G03780_001 I 0.897
GRMZM2G315140 Zea mays GRMZM2G315140 I 0.897
Pavir.J39804 Panicum virgatum Pavir.J39804 I 0.897
Si017679m.g Setaria italica Si017679m.g I 0.897
OPUNC02G23550 Oryza punctata OPUNC02G23550 I 0.896
F775_08057 Aegilops tauschii F775_08057 I 0.895
BRADI3G50067 Brachypodium distachyon BRADI3G50067 I 0.895
TRIUR3_20707 Triticum urartu TRIUR3_20707 I 0.895
Traes_6BL_8F77BF933 Triticum aestivum Traes_6BL_8F77BF933 I 0.895
Traes_6DL_D0BE06357 Triticum aestivum Traes_6DL_D0BE06357 I 0.895
Traes_6AL_BB7207AD1 Triticum aestivum Traes_6AL_BB7207AD1 I 0.895
OLONG_018618 Oryza longistaminata OLONG_018618 I 0.894
Cucsa.320590 Cucumis sativus Cucsa.320590 I 0.892
LjSGA_069569.1 Lotus japonicus LjSGA_069569.1 I 0.892
BGIOSGA005950 Oryza indica BGIOSGA005950 I 0.891
GSMUA_Achr6G36840_001 Musa acuminata GSMUA_Achr6G36840_001 I 0.890
PK28510.1 Cannabis sativa PK28510.1 I 0.889
Sb04g033570 Sorghum bicolor Sb04g033570 I 0.889
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.888
Cucsa.302120 Cucumis sativus Cucsa.302120 I 0.888
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.886
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.886
30147.m014211 Ricinus communis 30147.m014211 I 0.886
Pm019490 Prunus mume Pm019490 I 0.886
Pm019488 Prunus mume Pm019488 I 0.886
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.886
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.886
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I 0.885
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.885
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I 0.885
Bra039915 Brassica rapa Bra039915 I 0.884
Traes_2BL_24E6E8DF9 Triticum aestivum Traes_2BL_24E6E8DF9 I 0.884
MLOC_15746 Hordeum vulgare MLOC_15746 I 0.884
Traes_2AL_82C3E7E14 Triticum aestivum Traes_2AL_82C3E7E14 I 0.884
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I 0.883
MTR_4g036030 Medicago truncatula MTR_4g036030 I 0.882
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.882
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.882
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.882
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.882
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.882
TCM_014939 Theobroma cacao TCM_014939 I 0.882
AMTR_s00016p00196760 Amborella trichopoda AMTR_s00016p00196760 N 0.881
Traes_2DL_343FA6101 Triticum aestivum Traes_2DL_343FA6101 I 0.880
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.880
PK23416.1 Cannabis sativa PK23416.1 I 0.880
SELMODRAFT_408624 Selaginella moellendorffii SELMODRAFT_408624 I 0.880
SELMODRAFT_402243 Selaginella moellendorffii SELMODRAFT_402243 I 0.880
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.880
Lus10041822.g Linum usitatissimum Lus10041822.g I 0.879
Lus10028372.g Linum usitatissimum Lus10028372.g I 0.879
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.879
28200.m000189 Ricinus communis 28200.m000189 I 0.879
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.879
Cla006372 Citrullus lanatus Cla006372 I 0.879
TCM_016035 Theobroma cacao TCM_016035 I 0.879
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.879
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.879
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.878
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.878
MTR_5g012080 Medicago truncatula MTR_5g012080 I 0.878
SELMODRAFT_71405 Selaginella moellendorffii SELMODRAFT_71405 I 0.877
SELMODRAFT_100973 Selaginella moellendorffii SELMODRAFT_100973 I 0.877
MDP0000320566 Malus domestica MDP0000320566 I 0.877
mgf021916m Mimulus guttatus mgf021916m I 0.877
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I 0.876
Bra016783 Brassica rapa Bra016783 I 0.876
Bo8g062650 Brassica oleracea Bo8g062650 I 0.876
NAC007 Arabidopsis thaliana AT1G12260 D 0.876
GLYMA06G47680 Glycine max GLYMA06G47680 I 0.876
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I 0.876
Carubv10009366m.g Capsella rubella Carubv10009366m.g I 0.876
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I 0.876
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I 0.876
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.876
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I 0.876
GLYMA11G03340 Glycine max GLYMA11G03340 I 0.876
OB08G10370 Oryza brachyantha OB08G10370 N 0.874
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.874
OPUNC08G00360 Oryza punctata OPUNC08G00360 N 0.874
GLYMA12G00760 Glycine max GLYMA12G00760 I 0.874
OS08G0103900 Oryza sativa OS08G0103900 N 0.874
MTR_4g101680 Medicago truncatula MTR_4g101680 I 0.874
Bo8g108300 Brassica oleracea Bo8g108300 I 0.874
Bra026981 Brassica rapa Bra026981 I 0.874
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.874
Sb01g030760 Sorghum bicolor Sb01g030760 I 0.872
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.872
LPERR08G00380 Leersia perrieri LPERR08G00380 N 0.872
OMERI08G00600 Oryza meridionalis OMERI08G00600 N 0.872