CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.259.32.1
(
Physcomitrella patens
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
e_gw1.259.32.1
T297036_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.279.28.1
M02380_2.00
Physcomitrella patens
NNNTTGHKTDY
RHAMDCAANNN
PBM
Weirauch et al.(2014)
pTH8466
0.939
0.825
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.259.32.1
NAC/NAM
12
138
PPGFRFHPTDDELVSFYLTRKVKNPHFAVKSIPNVSLNKCEPWDLPEKAKVGEKEWYFFSLRDRKYPTGIRTNRATEKGYWKATGKDRDVMNYSTHLLVGMKKTLVFYLGRAPKGAKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Physcomitrella patens
TFs
172 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.0556s0555
Boechera stricta
Bostr.0556s0555
I
0.959
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.956
PGSC0003DMG400009920
Solanum tuberosum
PGSC0003DMG400009920
I
0.952
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.952
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.951
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.951
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.949
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.949
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.948
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.947
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.946
F775_20638
Aegilops tauschii
F775_20638
I
0.946
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.946
OS08G0511200
Oryza sativa
OS08G0511200
I
0.945
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.945
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.945
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.945
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.945
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.945
ORGLA04G0119700
Oryza glaberrima
ORGLA04G0119700
I
0.940
BGIOSGA016546
Oryza indica
BGIOSGA016546
I
0.940
Si010553m.g
Setaria italica
Si010553m.g
I
0.940
OBART04G14970
Oryza barthii
OBART04G14970
I
0.940
ORUFI04G16370
Oryza rufipogon
ORUFI04G16370
I
0.940
OGLUM04G14830
Oryza glumaepatula
OGLUM04G14830
I
0.940
ONIVA04G13100
Oryza nivara
ONIVA04G13100
I
0.940
OS04G0460600
Oryza sativa
OS04G0460600
I
0.940
OLONG_008218
Oryza longistaminata
OLONG_008218
I
0.939
e_gw1.279.28.1
Physcomitrella patens
e_gw1.279.28.1
D
0.939
Sb06g019010
Sorghum bicolor
Sb06g019010
I
0.935
Pavir.Gb01850
Panicum virgatum
Pavir.Gb01850
I
0.933
LPERR04G11740
Leersia perrieri
LPERR04G11740
I
0.928
OLONG_023103
Oryza longistaminata
OLONG_023103
I
0.924
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.924
Cagra.27691s0001
Capsella grandiflora
Cagra.27691s0001
I
0.922
GRMZM2G009892
Zea mays
GRMZM2G009892
I
0.919
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.918
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.918
AMTR_s00018p00074980
Amborella trichopoda
AMTR_s00018p00074980
I
0.915
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.915
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.914
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.911
GRMZM2G167018
Zea mays
GRMZM2G167018
I
0.910
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.909
TRIUR3_09915
Triticum urartu
TRIUR3_09915
N
0.907
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.907
F775_32832
Aegilops tauschii
F775_32832
N
0.907
Traes_2BL_6AEE8AC28
Triticum aestivum
Traes_2BL_6AEE8AC28
N
0.907
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.907
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.907
Traes_2DL_DF7B995C9
Triticum aestivum
Traes_2DL_DF7B995C9
N
0.907
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.907
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.907
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.907
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.906
Si032702m.g
Setaria italica
Si032702m.g
I
0.906
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.906
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.906
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.906
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.906
Traes_2AL_57BF37A86
Triticum aestivum
Traes_2AL_57BF37A86
N
0.906
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.905
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.905
LPERR02G17680
Leersia perrieri
LPERR02G17680
N
0.905
OB09G25590
Oryza brachyantha
OB09G25590
I
0.905
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.905
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.905
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.905
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.903
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.902
F775_13961
Aegilops tauschii
F775_13961
I
0.901
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.901
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.900
Pavir.Ga00022
Panicum virgatum
Pavir.Ga00022
I
0.900
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.900
OB02G29280
Oryza brachyantha
OB02G29280
N
0.900
Bo5g002810
Brassica oleracea
Bo5g002810
I
0.899
GRMZM5G898290
Zea mays
GRMZM5G898290
N
0.899
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
0.898
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.898
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.898
Si017567m.g
Setaria italica
Si017567m.g
N
0.897
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.896
BRADI3G46900
Brachypodium distachyon
BRADI3G46900
I
0.894
MLOC_25708
Hordeum vulgare
MLOC_25708
N
0.894
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.894
OS02G0579000
Oryza sativa
OS02G0579000
I
0.893
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.893
ORUFI02G22930
Oryza rufipogon
ORUFI02G22930
I
0.893
OMERI02G21390
Oryza meridionalis
OMERI02G21390
I
0.893
OBART02G21850
Oryza barthii
OBART02G21850
I
0.893
BGIOSGA008492
Oryza indica
BGIOSGA008492
I
0.893
ONIVA02G24080
Oryza nivara
ONIVA02G24080
I
0.893
OGLUM02G22030
Oryza glumaepatula
OGLUM02G22030
I
0.893
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.892
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.892
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.892
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.892
OLONG_022415
Oryza longistaminata
OLONG_022415
I
0.891
BGIOSGA001578
Oryza indica
BGIOSGA001578
I
0.891
OMERI01G15230
Oryza meridionalis
OMERI01G15230
I
0.891
OGLUM01G19440
Oryza glumaepatula
OGLUM01G19440
I
0.891
BGIOSGA002597
Oryza indica
BGIOSGA002597
I
0.891
OBART01G00360
Oryza barthii
OBART01G00360
I
0.891
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.891
OBART01G16620
Oryza barthii
OBART01G16620
I
0.891
OS01G0393100
Oryza sativa
OS01G0393100
I
0.891
ONIVA01G00280
Oryza nivara
ONIVA01G00280
I
0.891
ORUFI01G18470
Oryza rufipogon
ORUFI01G18470
I
0.891
OGLUM01G00350
Oryza glumaepatula
OGLUM01G00350
I
0.891
ORGLA12G0187900
Oryza glaberrima
ORGLA12G0187900
I
0.891
ORUFI01G00320
Oryza rufipogon
ORUFI01G00320
I
0.891
ONIVA01G18370
Oryza nivara
ONIVA01G18370
I
0.891
POPTR_0003s14950
Populus trichocarpa
POPTR_0003s14950
I
0.890
OS01G0104500
Oryza sativa
OS01G0104500
I
0.890
Pavir.Gb00488
Panicum virgatum
Pavir.Gb00488
N
0.888
Cla023594
Citrullus lanatus
Cla023594
I
0.888
Sb09g008000
Sorghum bicolor
Sb09g008000
N
0.887
OB01G10300
Oryza brachyantha
OB01G10300
I
0.887
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
0.887
OPUNC01G00320
Oryza punctata
OPUNC01G00320
I
0.887
OMERI01G15210
Oryza meridionalis
OMERI01G15210
I
0.886
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.886
Gorai.010G171100
Gossypium raimondii
Gorai.010G171100
I
0.886
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.885
F775_30297
Aegilops tauschii
F775_30297
I
0.885
Carubv10009451m.g
Capsella rubella
Carubv10009451m.g
I
0.885
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.885
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.885
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.884
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.884
mgf013201m
Mimulus guttatus
mgf013201m
I
0.884
Bo3g065200
Brassica oleracea
Bo3g065200
I
0.883
NAC026
Arabidopsis thaliana
AT1G62700
I
0.883
Thhalv10023502m.g
Eutrema salsugineum
Thhalv10023502m.g
I
0.883
PGSC0003DMG400039898
Solanum tuberosum
PGSC0003DMG400039898
I
0.882
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.881
PK26157.1
Cannabis sativa
PK26157.1
I
0.881
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.881
Si010680m.g
Setaria italica
Si010680m.g
I
0.881
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.880
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.879
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.879
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.879
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.879
ANAC001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000119
I
0.878
cassava4505.m1
Manihot esculenta
cassava4505.m1
I
0.878
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.878
mgf004020m
Mimulus guttatus
mgf004020m
I
0.878
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.878
Si036303m.g
Setaria italica
Si036303m.g
I
0.877
Cla011742
Citrullus lanatus
Cla011742
I
0.877
TCM_035160
Theobroma cacao
TCM_035160
I
0.877
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.877
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.875
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.875
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.873
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.872
Ca_13571
Cicer arietinum
Ca_13571
I
0.872
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.872
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.872
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
0.871
OS05G0415400
Oryza sativa
OS05G0415400
I
0.871
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
0.871
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
0.871
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
0.871
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.871
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.871
BRADI1G52480
Brachypodium distachyon
BRADI1G52480
N
0.871
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
0.871
OBART05G16540
Oryza barthii
OBART05G16540
I
0.871
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
0.871