e_gw1.279.28.1 (Physcomitrella patens)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 e_gw1.279.28.1 T297038_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.279.28.1
M02380_2.00
Physcomitrella patens
NNNTTGHKTDY

RHAMDCAANNN
PBM
Weirauch et al.(2014)
pTH8466
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.327.11.1
M02382_2.00
Physcomitrella patens
NTTDYRTWWN

NWWAYRHAAN
PBM
Weirauch et al.(2014)
pTH8478
0.906 0.798
e_gw1.288.15.1
M02381_2.00
Physcomitrella patens
NNNBAMKNHW

WDNMKTVNNN
PBM
Weirauch et al.(2014)
pTH8467
0.872 0.781
For this family, TFs with SR scores > 0.870 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02380_2.00 NAC/NAM 10 136

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.279.28.1 NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Physcomitrella patens TFs

Invalid Input OrderBy

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action