gw1.251.65.1 (Physcomitrella patens)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gw1.251.65.1 T297050_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK11990.1
M01290_2.00 		Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH		 PBM
Lambert et al.(2019)
pTH11336 		0.917 0.588
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.911 0.640
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.911 0.640
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.909 0.640
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.909 0.640
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.251.65.1 NAC/NAM 5 147

Links

Other NAC/NAM family TFs
Other Physcomitrella patens TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.940
Gorai.009G166300 Gossypium raimondii Gorai.009G166300 I 0.939
GRMZM2G058518 Zea mays GRMZM2G058518 I 0.939
MTR_8g102240 Medicago truncatula MTR_8g102240 I 0.938
Cucsa.116800 Cucumis sativus Cucsa.116800 I 0.937
Ca_05913 Cicer arietinum Ca_05913 I 0.937
Aquca_001_00211 Aquilegia coerulea Aquca_001_00211 I 0.937
Cla017075 Citrullus lanatus Cla017075 I 0.937
orange1.1g012118m.g Citrus sinensis orange1.1g012118m.g I 0.936
Bostr.15697s0168 Boechera stricta Bostr.15697s0168 I 0.936
Ciclev10010579m.g Citrus clementina Ciclev10010579m.g I 0.936
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.925
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.924
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.924
Sb10g009670 Sorghum bicolor Sb10g009670 I 0.920
PK11990.1 Cannabis sativa PK11990.1 D 0.917
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.917
PK28347.1 Cannabis sativa PK28347.1 I 0.917
GRMZM2G078954 Zea mays GRMZM2G078954 I 0.914
GRMZM2G086768 Zea mays GRMZM2G086768 I 0.914
GRMZM2G027309 Zea mays GRMZM2G027309 I 0.914
GRMZM2G379608 Zea mays GRMZM2G379608 I 0.914
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.914
GLYMA07G32250 Glycine max GLYMA07G32250 I 0.913
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.913
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.912
MDP0000124509 Malus domestica MDP0000124509 I 0.912
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.912
29912.m005354 Ricinus communis 29912.m005354 I 0.912
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.912
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.912
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.912
MDP0000309351 Malus domestica MDP0000309351 I 0.912
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.912
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.912
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.912
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.912
MDP0000276278 Malus domestica MDP0000276278 I 0.912
TCM_037747 Theobroma cacao TCM_037747 I 0.912
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.912
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.912
Cla011431 Citrullus lanatus Cla011431 I 0.912
TCM_029798 Theobroma cacao TCM_029798 I 0.912
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.912
Pm010104 Prunus mume Pm010104 I 0.912
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.911
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.911
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.911
Bra011090 Brassica rapa Bra011090 I 0.911
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.911
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.911
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.911
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.911
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.911
Bo1g016630 Brassica oleracea Bo1g016630 I 0.911
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.911
PK27085.1 Cannabis sativa PK27085.1 D 0.911
OS01G0191300 Oryza sativa OS01G0191300 I 0.911
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.911
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.911
OB01G15780 Oryza brachyantha OB01G15780 I 0.911
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.911
anac075 Arabidopsis thaliana AT4G29230 D 0.911
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.911
OBART01G05840 Oryza barthii OBART01G05840 I 0.911
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.911
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.911
Pm027280 Prunus mume Pm027280 I 0.911
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.911
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.911
Bra024152 Brassica rapa Bra024152 I 0.910
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.910
evm.TU.supercontig_2586.1 Carica papaya evm.TU.supercontig_2586.1 I 0.910
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.910
Bo7g113660 Brassica oleracea Bo7g113660 I 0.910
Ca_06348 Cicer arietinum Ca_06348 I 0.909
ANAC010 Arabidopsis lyrata scaffold_103183.1 I 0.909
ANAC010 Vitis vinifera VIT_10s0003g00350 I 0.909
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.909
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I 0.909
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.909
Bra032910 Brassica rapa Bra032910 I 0.909
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.909
Bo5g055990 Brassica oleracea Bo5g055990 I 0.909
NAC010 Arabidopsis thaliana AT1G28470 D 0.909
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I 0.909
Carubv10009638m.g Capsella rubella Carubv10009638m.g I 0.909
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.908
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.908
GLYMA13G24320 Glycine max GLYMA13G24320 I 0.908
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.908
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.908
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.907
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.905
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.905
Si001527m.g Setaria italica Si001527m.g I 0.904
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I 0.903
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.901
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.901
GSMUA_Achr6G11230_001 Musa acuminata GSMUA_Achr6G11230_001 I 0.901
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.901
Si002301m.g Setaria italica Si002301m.g I 0.901
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.901
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.901
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.901
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.900
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.900
Ca_02457 Cicer arietinum Ca_02457 I 0.899
Bo7g047040 Brassica oleracea Bo7g047040 I 0.899
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.899
Ca_11273 Cicer arietinum Ca_11273 I 0.897
GLYMA06G44250 Glycine max GLYMA06G44250 I 0.897
ORUFI01G29010 Oryza rufipogon ORUFI01G29010 I 0.895
OPUNC01G25960 Oryza punctata OPUNC01G25960 I 0.895
OMERI01G23720 Oryza meridionalis OMERI01G23720 I 0.895
GLYMA07G15180 Glycine max GLYMA07G15180 I 0.895
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I 0.895
OLONG_014922 Oryza longistaminata OLONG_014922 I 0.895
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.895
Cucsa.126960 Cucumis sativus Cucsa.126960 I 0.895
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.895
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I 0.894
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I 0.894
GLYMA12G33460 Glycine max GLYMA12G33460 I 0.894
GLYMA13G36980 Glycine max GLYMA13G36980 I 0.894
Si006639m.g Setaria italica Si006639m.g I 0.893
Bra030099 Brassica rapa Bra030099 I 0.891
LPERR01G22300 Leersia perrieri LPERR01G22300 I 0.890
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I 0.889
GSMUA_Achr4G02730_001 Musa acuminata GSMUA_Achr4G02730_001 I 0.889
MTR_2g090735 Medicago truncatula MTR_2g090735 I 0.889
Si019444m.g Setaria italica Si019444m.g I 0.886
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.886
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.885
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.884
OMERI06G18870 Oryza meridionalis OMERI06G18870 I 0.884
OS06G0560300 Oryza sativa OS06G0560300 I 0.884
BGIOSGA021039 Oryza indica BGIOSGA021039 I 0.884
OBART06G18520 Oryza barthii OBART06G18520 I 0.884
ORUFI06G19520 Oryza rufipogon ORUFI06G19520 I 0.884
ORGLA06G0153500 Oryza glaberrima ORGLA06G0153500 I 0.884
ONIVA06G22200 Oryza nivara ONIVA06G22200 I 0.884
OGLUM06G19630 Oryza glumaepatula OGLUM06G19630 I 0.884
cassava1596.valid.m1 Manihot esculenta cassava1596.valid.m1 I 0.883
Sb09g006015 Sorghum bicolor Sb09g006015 I 0.882
30190.m010767 Ricinus communis 30190.m010767 I 0.880
OB06G19430 Oryza brachyantha OB06G19430 I 0.879
LPERR05G21400 Leersia perrieri LPERR05G21400 I 0.879
Cla009808 Citrullus lanatus Cla009808 I 0.878
Lus10015392.g Linum usitatissimum Lus10015392.g I 0.876
MTR_4g078875 Medicago truncatula MTR_4g078875 I 0.876
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.875
Lus10013967.g Linum usitatissimum Lus10013967.g I 0.875
Sb09g006018 Sorghum bicolor Sb09g006018 I 0.874
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.871
PK25812.1 Cannabis sativa PK25812.1 I 0.871
Pavir.Eb02718 Panicum virgatum Pavir.Eb02718 I 0.871