TF Information

gw1.6.394.1 *(Physcomitrella patens)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	gw1.6.394.1	T297054_2.00	JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC48 M11084_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$NAC6_01	0.935	0.549
NAC002 M00970_2.00	Arabidopsis thaliana	NBACGYAWMN	NKWTRCGTVN	PBM Lindemose et al.(2014) ATAF1	0.933	0.549
NAC002 M07159_2.00	Arabidopsis thaliana	KVCGTRWNNNWHWHKNHHWYND	HNRWDDNMDWDWNNNWYACGBM	Dap-seq OMalley et al.(2016) ATAF1_col_a	0.933	0.549
NAC002 M07160_2.00	Arabidopsis thaliana	YACGY	RCGTR	Dap-seq OMalley et al.(2016) ATAF1_colamp_a	0.933	0.549
NAC101 M07241_2.00	Arabidopsis thaliana	TGCKTVNDNHNYAMG	CKTRNDNHNBAMGCA	Dap-seq OMalley et al.(2016) VND6_colamp_a	0.932	0.655
NAC101 M07242_2.00	Arabidopsis thaliana	TTGCKTVHDNNNYAMGYHWHN	NDWDRCKTRNNNHDBAMGCAA	Dap-seq OMalley et al.(2016) VND6_col_v31	0.932	0.655
AT3G12910 M07204_2.00	Arabidopsis thaliana	YGSCGKNDNDDHNMCGB	VCGKNDHHNHNMCGSCR	Dap-seq OMalley et al.(2016) AT3G12910_col_a	0.921	0.549
ANAC011 M07169_2.00	Arabidopsis thaliana	RTTDCTTSNNHNDCAAGHWAY	RTWDCTTGHNDNNSAAGHAAY	Dap-seq OMalley et al.(2016) ANAC011_col_a	0.882	0.575
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
gw1.6.394.1	NAC/NAM	2	131	PVGFRFHPTDEELVGYYLHGKVGRAQRDQFIQELDLYKIEPWDLHEVCRIGDDAPENQSDWYFFSHKDKKYPTGNRANRATTAGFWKATGRDKPIHTQRHVIGMRKTLVFYRGRAPHGQKTDWIMHEFRL

Links
Other NAC/NAM family TFs
Other *Physcomitrella patens* TFs

Invalid Input OrderBy

298 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action