Bostr.0568s0569 (Boechera stricta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Bostr.0568s0569 T297232_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.996 1.000
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.996 1.000
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.890 0.579
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.890 0.579
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.890 0.579
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.879 0.526
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.875 0.561
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0568s0569.1.p NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Boechera stricta TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NAC101 Arabidopsis thaliana AT5G62380 D 0.996
VND6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001814 I 0.996
Bo3g107700 Brassica oleracea Bo3g107700 I 0.995
Carubv10026697m.g Capsella rubella Carubv10026697m.g I 0.995
Bra010077 Brassica rapa Bra010077 I 0.995
Bra029266 Brassica rapa Bra029266 I 0.995
Bra035896 Brassica rapa Bra035896 I 0.995
Thhalv10004488m.g Eutrema salsugineum Thhalv10004488m.g I 0.995
Cagra.4003s0027 Capsella grandiflora Cagra.4003s0027 I 0.995
Bo2g164090 Brassica oleracea Bo2g164090 I 0.995
Bo9g014940 Brassica oleracea Bo9g014940 I 0.993
NAC026 Arabidopsis thaliana AT1G62700 I 0.983
mgf002365m Mimulus guttatus mgf002365m I 0.983
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.983
Cla011742 Citrullus lanatus Cla011742 I 0.983
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.940
Si022723m.g Setaria italica Si022723m.g I 0.936
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.935
Si036303m.g Setaria italica Si036303m.g I 0.933
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.932
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.932
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I 0.928
mgf004020m Mimulus guttatus mgf004020m I 0.923
GRMZM2G052239 Zea mays GRMZM2G052239 I 0.920
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.918
MDP0000285555 Malus domestica MDP0000285555 I 0.917
Gorai.010G236700 Gossypium raimondii Gorai.010G236700 I 0.916
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.915
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.915
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.914
mgf019285m Mimulus guttatus mgf019285m I 0.912
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.909
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.909
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.908
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.908
F775_13961 Aegilops tauschii F775_13961 I 0.907
Si022714m.g Setaria italica Si022714m.g I 0.907
F775_30297 Aegilops tauschii F775_30297 I 0.907
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I 0.907
TRIUR3_29250 Triticum urartu TRIUR3_29250 I 0.907
Bra034719 Brassica rapa Bra034719 I 0.906
MTR_2g068880 Medicago truncatula MTR_2g068880 I 0.906
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.905
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.905
Ca_13571 Cicer arietinum Ca_13571 I 0.904
POPTR_0003s14950 Populus trichocarpa POPTR_0003s14950 I 0.903
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.903
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.902
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.902
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.902
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.902
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.902
PK26157.1 Cannabis sativa PK26157.1 I 0.902
SapurV1A.0059s0580 Salix purpurea SapurV1A.0059s0580 I 0.902
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.901
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I 0.900
Gorai.010G171100 Gossypium raimondii Gorai.010G171100 I 0.900
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.900
OMERI04G25730 Oryza meridionalis OMERI04G25730 I 0.899
GLYMA12G00760 Glycine max GLYMA12G00760 I 0.899
BGIOSGA018048 Oryza indica BGIOSGA018048 I 0.898
TCM_035160 Theobroma cacao TCM_035160 I 0.898
ONIVA05G17220 Oryza nivara ONIVA05G17220 I 0.898
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I 0.898
OS05G0415400 Oryza sativa OS05G0415400 I 0.898
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.898
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I 0.898
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I 0.898
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.898
OPUNC05G14600 Oryza punctata OPUNC05G14600 I 0.898
OBART05G16540 Oryza barthii OBART05G16540 I 0.898
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I 0.898
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I 0.898
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.897
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.897
Pm019488 Prunus mume Pm019488 I 0.897
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.897
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.897
30147.m014211 Ricinus communis 30147.m014211 I 0.897
Pm019490 Prunus mume Pm019490 I 0.897
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.896
anac032 Vitis vinifera VIT_18s0001g02300 I 0.896
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.895
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.895
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.895
mgf015836m Mimulus guttatus mgf015836m I 0.895
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.895
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.895
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.895
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.894
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.894
mgf013201m Mimulus guttatus mgf013201m I 0.894
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.893
Si032702m.g Setaria italica Si032702m.g I 0.893
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.892
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.892
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.892
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.892
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.892
OB09G25590 Oryza brachyantha OB09G25590 I 0.892
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.892
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.892
MDP0000206868 Malus domestica MDP0000206868 I 0.892
TCM_014939 Theobroma cacao TCM_014939 I 0.892
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.892
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.892
mgf021916m Mimulus guttatus mgf021916m I 0.891
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.891
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.890
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.890
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.890
Bra033239 Brassica rapa Bra033239 I 0.890
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.890
Sb07g005610 Sorghum bicolor Sb07g005610 I 0.890
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.890
Bo5g001100 Brassica oleracea Bo5g001100 I 0.890
NAC002 Arabidopsis thaliana AT1G01720 D 0.890
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.890
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.890
TCM_029321 Theobroma cacao TCM_029321 I 0.890
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.889
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.889
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.889
Cla006372 Citrullus lanatus Cla006372 I 0.889
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.889
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.889
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.889
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.889
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.889
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I 0.888
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.888
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.888
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.888
28200.m000189 Ricinus communis 28200.m000189 I 0.888
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.888
TCM_016035 Theobroma cacao TCM_016035 I 0.888
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.888
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.888
OPUNC04G28220 Oryza punctata OPUNC04G28220 I 0.888
OMERI05G14410 Oryza meridionalis OMERI05G14410 I 0.887
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.887
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.886
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.885
cassava39074.m1 Manihot esculenta cassava39074.m1 I 0.885
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.884
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I 0.884
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.884
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I 0.884
Cla023594 Citrullus lanatus Cla023594 I 0.884
F775_20638 Aegilops tauschii F775_20638 I 0.884
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.883
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.883
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.883
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.883
Cagra.5641s0055 Capsella grandiflora Cagra.5641s0055 I 0.882
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.882
Carubv10014270m.g Capsella rubella Carubv10014270m.g I 0.882
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.882
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.882
OS08G0157900 Oryza sativa OS08G0157900 I 0.882
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.882
Bostr.3640s0064 Boechera stricta Bostr.3640s0064 I 0.882
SELMODRAFT_71305 Selaginella moellendorffii SELMODRAFT_71305 I 0.881
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I 0.881
Bo3g065200 Brassica oleracea Bo3g065200 I 0.881
Bo1g138800 Brassica oleracea Bo1g138800 I 0.881
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I 0.881
Bra039353 Brassica rapa Bra039353 I 0.881
OS04G0691300 Oryza sativa OS04G0691300 I 0.881
SELMODRAFT_69090 Selaginella moellendorffii SELMODRAFT_69090 I 0.881
ONIVA04G29890 Oryza nivara ONIVA04G29890 I 0.881
BGIOSGA014034 Oryza indica BGIOSGA014034 I 0.881
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I 0.881
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.881
Thhalv10021225m.g Eutrema salsugineum Thhalv10021225m.g I 0.879
AT3G12910 Arabidopsis thaliana AT3G12910 D 0.879
GRMZM2G167018 Zea mays GRMZM2G167018 I 0.879
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.879
fgenesh2_kg.3__1353__AT3G12910.1 Arabidopsis lyrata fgenesh2_kg.3__1353__AT3G12910.1 I 0.879
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.879
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.879
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.878
F775_28813 Aegilops tauschii F775_28813 I 0.876
MLOC_59162 Hordeum vulgare MLOC_59162 I 0.876
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.876
TRIUR3_14109 Triticum urartu TRIUR3_14109 I 0.876
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I 0.876
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I 0.876
BGIOSGA000374 Oryza indica BGIOSGA000374 I 0.875
LPERR01G34090 Leersia perrieri LPERR01G34090 I 0.875
OPUNC01G38300 Oryza punctata OPUNC01G38300 I 0.875
TCM_029796 Theobroma cacao TCM_029796 I 0.875
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I 0.875
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I 0.875
NAC48 Oryza sativa OS01G0884300 D 0.875
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I 0.875
ONIVA01G44460 Oryza nivara ONIVA01G44460 I 0.875
OB01G48340 Oryza brachyantha OB01G48340 I 0.875
OMERI01G36460 Oryza meridionalis OMERI01G36460 I 0.875
OBART01G39590 Oryza barthii OBART01G39590 I 0.875
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I 0.875
GLYMA05G04250 Glycine max GLYMA05G04250 I 0.874
GLYMA17G14700 Glycine max GLYMA17G14700 I 0.874
Sb03g041920 Sorghum bicolor Sb03g041920 I 0.874
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.874
Si002413m.g Setaria italica Si002413m.g I 0.873
GRMZM2G014653 Zea mays GRMZM2G014653 I 0.873
MDP0000320566 Malus domestica MDP0000320566 I 0.873
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.873
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.873
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.872
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I 0.872
Pm023559 Prunus mume Pm023559 I 0.872
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.872
MDP0000226701 Malus domestica MDP0000226701 I 0.871
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.871
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.871
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.870
Bo9g036910 Brassica oleracea Bo9g036910 I 0.027