CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.2570s0302
(
Boechera stricta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Bostr.2570s0302
T297282_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac046
M00884_2.00
Arabidopsis thaliana
NHMCGCMABNN
NNVTKGCGKDN
PBM
Franco-Zorrilla et al.(2014)
ANAC46
0.969
0.991
anac046
M07196_2.00
Arabidopsis thaliana
CKTSHNNHWCAMGYHAH
DTDRCKTGWDNNDSAMG
Dap-seq
OMalley et al.(2016)
ANAC046_colamp_a
0.969
0.991
anac046
M07197_2.00
Arabidopsis thaliana
NNTWNCKTGTNNNDCAMGYHA
TDRCKTGHNNNACAMGNWANN
Dap-seq
OMalley et al.(2016)
ANAC046_col
0.969
0.991
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.941
0.921
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.941
0.921
ANAC100
M02377_2.00
Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH
PBM
Weirauch et al.(2014)
pTH9234
0.871
0.789
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.2570s0302.1.p
NAC/NAM
21
146
PPGFRFHPTDEEIITHYLKEKVFNIRFTAAAIGQADLNKNEPWDLPKIAKMGEKEFYFFCQRDRKYPTGMRTNRATVSGYWKATGKDKEIFRGKGCLVGMKKTLVFYRGRAPKGEKTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Boechera stricta
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy