CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.7867s1416
(
Boechera stricta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Bostr.7867s1416
T297340_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NTL9
M02371_2.00
Arabidopsis thaliana
ATTACTTAA
TTAAGTAAT
PBM
Weirauch et al.(2014)
pTH8207
0.972
0.991
NTL9
M11081_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBNAC_01
0.972
0.991
NTL9
M11082_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBNAC_02
0.972
0.991
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.7867s1416.1.p
NAC/NAM
10
136
PLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDVDVCKWEPWDLPALSVIKTDDPEWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTLVFYRGRAPKGERTNWIMHEYRP
Links
Other
NAC/NAM
family TFs
Other
Boechera stricta
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy