Cagra.0334s0001 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.0334s0001 T297352_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.918 0.889
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0334s0001.1.p NAC/NAM 1 106

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.942
NAC69 Arabidopsis thaliana AT4G01550 D 0.918
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.918
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.918
Bra008553 Brassica rapa Bra008553 I 0.899
Bra036328 Brassica rapa Bra036328 I 0.896
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.882
Bo00853s060 Brassica oleracea Bo00853s060 I 0.878
Bo9g004070 Brassica oleracea Bo9g004070 I 0.875