Cagra.12529s0001 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.12529s0001 T297383_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.938 0.704
NAC68
M07214_2.00 		Arabidopsis thaliana
RCTTVYNBNNYAAGY
RCTTRNNVNRBAAGY		 Dap-seq
OMalley et al.(2016)
NTM1_col_a 		0.883 0.704
NAC68
M07215_2.00 		Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN
NNNDRDRDNNAAAAAGYRRHD		 Dap-seq
OMalley et al.(2016)
NTM1_colamp_a 		0.883 0.704
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.12529s0001.1.p NAC/NAM 5 133
Cagra.12529s0001.2.p NAC/NAM 5 133

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action