Cagra.1838s0033 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.1838s0033 T297401_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC062
M00977_2.00 		Arabidopsis thaliana
NTTMCTTAV
BTAAGKAAN		 PBM
Lindemose et al.(2014)
NTL6 		0.944 0.947
NAC062
M07212_2.00 		Arabidopsis thaliana
CTTMNHNNBYAAGNWWHN
NDWWNCTTRVNNDNKAAG		 Dap-seq
OMalley et al.(2016)
ANAC062_colamp_a 		0.944 0.947
NAC062
M07213_2.00 		Arabidopsis thaliana
TNCTTMDBNNBYAAG
CTTRVNNVHKAAGNA		 Dap-seq
OMalley et al.(2016)
ANAC062_col 		0.944 0.947
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1838s0033.1.p NAC/NAM 14 141

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action