Cagra.1968s0041 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.1968s0041 T297406_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC004
M07161_2.00
Arabidopsis thaliana
CTTVYNYNRYAAGY

RCTTRYNRNRBAAG
Dap-seq
OMalley et al.(2016)
ANAC004_col_a
0.923 0.635
NAC004
M07162_2.00
Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN

NNVWWRCTTRYNVNRBAAGBW
Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a
0.923 0.635
NAC005
M07163_2.00
Arabidopsis thaliana
WWNCTTVYNHHNYAAGTWW

WWACTTRNDDNRBAAGNWW
Dap-seq
OMalley et al.(2016)
ANAC005_col_a
0.904 0.600
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1968s0041.1.p NAC/NAM 13 141

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action