Cagra.2026s0002 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.2026s0002 T297413_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac046
M00884_2.00
Arabidopsis thaliana
NHMCGCMABNN

NNVTKGCGKDN
PBM
Franco-Zorrilla et al.(2014)
ANAC46
0.970 0.991
anac046
M07196_2.00
Arabidopsis thaliana
CKTSHNNHWCAMGYHAH

DTDRCKTGWDNNDSAMG
Dap-seq
OMalley et al.(2016)
ANAC046_colamp_a
0.970 0.991
anac046
M07197_2.00
Arabidopsis thaliana
NNTWNCKTGTNNNDCAMGYHA

TDRCKTGHNNNACAMGNWANN
Dap-seq
OMalley et al.(2016)
ANAC046_col
0.970 0.991
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB

VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.938 0.912
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA

TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.938 0.912
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2026s0002.1.p NAC/NAM 22 147

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action