Cagra.3166s0054 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.3166s0054 T297425_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.891 0.588
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.891 0.588
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3166s0054.1.p NAC/NAM 59 199

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10002665m.g Capsella rubella Carubv10002665m.g I 0.995
anac085 Arabidopsis thaliana AT5G14490 I 0.995
Bostr.2902s0186 Boechera stricta Bostr.2902s0186 I 0.994
anac085 Arabidopsis lyrata Al_scaffold_0006_1351 I 0.991
anac044 Arabidopsis thaliana AT3G01600 N 0.989
Bostr.1460s0050 Boechera stricta Bostr.1460s0050 N 0.989
anac044 Arabidopsis lyrata Al_scaffold_0003_51 N 0.988
Cagra.1561s0026 Capsella grandiflora Cagra.1561s0026 N 0.988
Bra006257 Brassica rapa Bra006257 I 0.986
Thhalv10022099m.g Eutrema salsugineum Thhalv10022099m.g N 0.986
Carubv10014004m.g Capsella rubella Carubv10014004m.g N 0.981
Thhalv10015728m.g Eutrema salsugineum Thhalv10015728m.g N 0.979
Bra001000 Brassica rapa Bra001000 N 0.964
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.962
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.947
TCM_016984 Theobroma cacao TCM_016984 I 0.947
Cla004701 Citrullus lanatus Cla004701 I 0.946
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.945
PK17141.1 Cannabis sativa PK17141.1 I 0.944
orange1.1g014310m.g Citrus sinensis orange1.1g014310m.g I 0.940
Cucsa.011210 Cucumis sativus Cucsa.011210 I 0.940
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.940
Ciclev10031598m.g Citrus clementina Ciclev10031598m.g I 0.936
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I 0.932
PK25812.1 Cannabis sativa PK25812.1 I 0.921
MTR_1g093670 Medicago truncatula MTR_1g093670 I 0.919
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I 0.918
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I 0.918
MTR_5g053430 Medicago truncatula MTR_5g053430 I 0.915
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.910
29917.m002016 Ricinus communis 29917.m002016 I 0.910
Lus10003668.g Linum usitatissimum Lus10003668.g N 0.910
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I 0.909
mgf012882m Mimulus guttatus mgf012882m I 0.908
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.906
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.905
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.905
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.902
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.901
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.901
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.900
29738.m001046 Ricinus communis 29738.m001046 I 0.900
MTR_1g093680 Medicago truncatula MTR_1g093680 I 0.900
TCM_011869 Theobroma cacao TCM_011869 I 0.900
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.899
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.899
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.899
Cla020673 Citrullus lanatus Cla020673 I 0.899
Pm015625 Prunus mume Pm015625 I 0.898
Pm029010 Prunus mume Pm029010 I 0.898
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.894
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.894
MTR_7g033320 Medicago truncatula MTR_7g033320 I 0.893
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.893
Bra024197 Brassica rapa Bra024197 I 0.892
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I 0.892
Lus10021708.g Linum usitatissimum Lus10021708.g I 0.892
Cagra.1225s0041 Capsella grandiflora Cagra.1225s0041 I 0.891
Thhalv10025819m.g Eutrema salsugineum Thhalv10025819m.g I 0.891
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I 0.891
NAC073 Arabidopsis thaliana AT4G28500 D 0.891
Bra011034 Brassica rapa Bra011034 I 0.891
Carubv10005324m.g Capsella rubella Carubv10005324m.g I 0.891
Bo1g017410 Brassica oleracea Bo1g017410 I 0.891
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I 0.890
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.890
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I 0.888
SOG1 Arabidopsis lyrata scaffold_102939.1 I 0.885
SOG1 Arabidopsis thaliana AT1G25580 I 0.885
Cagra.11546s0003 Capsella grandiflora Cagra.11546s0003 I 0.885
Carubv10009087m.g Capsella rubella Carubv10009087m.g I 0.885
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I 0.885
GLYMA16G07501 Glycine max GLYMA16G07501 N 0.882
mgf018486m Mimulus guttatus mgf018486m I 0.881
Thhalv10007551m.g Eutrema salsugineum Thhalv10007551m.g I 0.878
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I 0.878
GLYMA19G08510 Glycine max GLYMA19G08510 N 0.877
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.874
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.872
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.872
cassava3690.m1 Manihot esculenta cassava3690.m1 I 0.872
Eucgr.D00591 Eucalyptus grandis Eucgr.D00591 I 0.872