Cagra.3356s0092 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.3356s0092 T297426_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac071
M07219_2.00 		Arabidopsis thaliana
CTTSHNNYHCAMGYW
WRCKTGDRNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_col_a 		0.956 0.927
anac071
M07220_2.00 		Arabidopsis thaliana
CTTSHNNNNSAMGYA
TRCKTSNNNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a 		0.956 0.927
anac096
M07237_2.00 		Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC
GRTTDCKTVNNNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a 		0.936 0.835
anac096
M07238_2.00 		Arabidopsis thaliana
TTNCTTSWNNHNYAMG
CKTRNDNNWSAAGNAA		 Dap-seq
OMalley et al.(2016)
ANAC096_col 		0.936 0.835
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3356s0092.1.p NAC/NAM 9 137

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

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82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action