CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10001688m.g
(
Capsella rubella
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Carubv10001688m.g
T297455_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10001688m
NAC/NAM
83
207
PIGYRFHPTEQELILHYLLPKAFASPLPSSIIPVFDLFFSHPLTFPGDSKEKHRYFFCKKKEVSSNEQRIKTVSGDGYWKHIGKERPIIACGKAVGIRRTLAFYETNKSSSNCNRTRWSMTEYSL
Links
Other
NAC/NAM
family TFs
Other
Capsella rubella
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.3166s0006
Capsella grandiflora
Cagra.3166s0006
N
0.969
anac084
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6001091
N
0.955
Bostr.2902s0136
Boechera stricta
Bostr.2902s0136
N
0.955
anac084
Arabidopsis thaliana
AT5G14000
N
0.954
Thhalv10014659m.g
Eutrema salsugineum
Thhalv10014659m.g
N
0.931
Bo9g166250
Brassica oleracea
Bo9g166250
N
0.910
Bra006229
Brassica rapa
Bra006229
N
0.906
Bo3g009490
Brassica oleracea
Bo3g009490
N
0.899
Bra008788
Brassica rapa
Bra008788
N
0.892