Carubv10008817m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10008817m.g T297483_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC13
M07170_2.00
Arabidopsis thaliana
TDNCTTGYYNNNCAAG

CTTGNNNRRCAAGNHA
Dap-seq
OMalley et al.(2016)
ANAC013_col_a
0.966 0.974
ANAC13
M07171_2.00
Arabidopsis thaliana
CTTGYBHNNCAAGNHAH

DTDNCTTGNNDVRCAAG
Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a
0.966 0.974
ANAC13
M11077_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC013_Q2
0.966 0.974
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10008817m NAC/NAM 12 136

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_045_00093 Aquilegia coerulea Aquca_045_00093 N 0.000
PK03289.1 Cannabis sativa PK03289.1 N 0.000
evm.TU.supercontig_19.173 Carica papaya evm.TU.supercontig_19.173 N 0.000
Ca_13412 Cicer arietinum Ca_13412 N 0.000
Ciclev10030684m.g Citrus clementina Ciclev10030684m.g N 0.000
Cucsa.136670 Cucumis sativus Cucsa.136670 N 0.000
Eucgr.J00206 Eucalyptus grandis Eucgr.J00206 N 0.000
GLYMA18G03080 Glycine max GLYMA18G03080 N 0.000
GLYMA11G35320 Glycine max GLYMA11G35320 N 0.000
Gorai.010G197800 Gossypium raimondii Gorai.010G197800 N 0.000
LPERR01G03530 Leersia perrieri LPERR01G03530 N 0.000
LjT47B05.50.nd Lotus japonicus LjT47B05.50.nd N 0.000
MTR_3g070780 Medicago truncatula MTR_3g070780 N 0.000
OBART01G03880 Oryza barthii OBART01G03880 N 0.000
OB01G13760 Oryza brachyantha OB01G13760 N 0.000
ORGLA01G0034200 Oryza glaberrima ORGLA01G0034200 N 0.000
OGLUM01G04180 Oryza glumaepatula OGLUM01G04180 N 0.000
BGIOSGA002351 Oryza indica BGIOSGA002351 N 0.000
OLONG_021562 Oryza longistaminata OLONG_021562 N 0.000
OMERI01G03770 Oryza meridionalis OMERI01G03770 N 0.000
ONIVA01G04320 Oryza nivara ONIVA01G04320 N 0.000
OPUNC01G03540 Oryza punctata OPUNC01G03540 N 0.000
ORUFI01G03990 Oryza rufipogon ORUFI01G03990 N 0.000
OS01G0158900 Oryza sativa OS01G0158900 N 0.000
Pavir.J07154 Panicum virgatum Pavir.J07154 N 0.000
Solyc06g051570.2 Solanum lycopersicum Solyc06g051570.2 N 0.000
Sb03g005310 Sorghum bicolor Sb03g005310 N 0.000
TCM_042496 Theobroma cacao TCM_042496 N 0.000
ATNFXL2 Vitis vinifera VIT_13s0067g00920 N 0.000
GRMZM2G139369 Zea mays GRMZM2G139369 N 0.000