Carubv10009524m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10009524m.g T297489_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.969 0.965
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.969 0.965
NAC025
M02368_2.00 		Arabidopsis thaliana
YACGYAAY
RTTRCGTR		 PBM
Weirauch et al.(2014)
pTH7656 		0.936 0.841
NAC047
M07198_2.00 		Arabidopsis thaliana
CACGB
VCGTG		 Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a 		0.876 0.796
NAC047
M07199_2.00 		Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW		 Dap-seq
OMalley et al.(2016)
ANAC047_col 		0.876 0.796
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10009524m NAC/NAM 55 183

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.972
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.969
NAC018 Arabidopsis thaliana AT1G52880 D 0.969
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.967
Bo1g128420 Brassica oleracea Bo1g128420 I 0.963
Bra021114 Brassica rapa Bra021114 I 0.963
anac025 Vitis vinifera VIT_00s0375g00040 I 0.954
MDP0000674514 Malus domestica MDP0000674514 I 0.953
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.949
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.948
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.948
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.947
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.944
NAC056 Arabidopsis thaliana AT3G15510 I 0.942
ATNAC2 Arabidopsis lyrata fgenesh2_kg.3__1698__AT3G15510.1 I 0.942
Bra018997 Brassica rapa Bra018997 I 0.942
Thhalv10022353m.g Eutrema salsugineum Thhalv10022353m.g I 0.942
Bo6g030920 Brassica oleracea Bo6g030920 I 0.942
Bostr.28625s0148 Boechera stricta Bostr.28625s0148 I 0.942
GLYMA06G38440 Glycine max GLYMA06G38440 I 0.939
Bra027237 Brassica rapa Bra027237 I 0.939
Carubv10014008m.g Capsella rubella Carubv10014008m.g I 0.939
Cla023771 Citrullus lanatus Cla023771 I 0.938
Cucsa.341790 Cucumis sativus Cucsa.341790 I 0.938
OB07G24770 Oryza brachyantha OB07G24770 I 0.937
VIT_19s0014g03300 Vitis vinifera VIT_19s0014g03300 I 0.937
Bra027101 Brassica rapa Bra027101 I 0.936
OPUNC07G17890 Oryza punctata OPUNC07G17890 I 0.936
LPERR07G16320 Leersia perrieri LPERR07G16320 I 0.936
Bo01282s010 Brassica oleracea Bo01282s010 I 0.936
Cagra.2213s0001 Capsella grandiflora Cagra.2213s0001 I 0.936
Carubv10021371m.g Capsella rubella Carubv10021371m.g I 0.936
OMERI07G15720 Oryza meridionalis OMERI07G15720 I 0.936
OLONG_002265 Oryza longistaminata OLONG_002265 I 0.936
MTR_4g089135 Medicago truncatula MTR_4g089135 I 0.936
NAC025 Arabidopsis thaliana AT1G61110 D 0.936
Bostr.10040s0089 Boechera stricta Bostr.10040s0089 I 0.936
anac025 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000277 I 0.936
Thhalv10023591m.g Eutrema salsugineum Thhalv10023591m.g I 0.934
Bo5g127030 Brassica oleracea Bo5g127030 I 0.933
LjSGA_023894.2 Lotus japonicus LjSGA_023894.2 I 0.932
PK19059.1 Cannabis sativa PK19059.1 I 0.932
Ca_19654 Cicer arietinum Ca_19654 I 0.932
Ciclev10008628m.g Citrus clementina Ciclev10008628m.g I 0.930
orange1.1g016791m.g Citrus sinensis orange1.1g016791m.g I 0.930
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.930
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.929
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.929
Si032676m.g Setaria italica Si032676m.g I 0.929
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.928
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.928
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.928
Lus10032657.g Linum usitatissimum Lus10032657.g I 0.928
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.928
Lus10043095.g Linum usitatissimum Lus10043095.g I 0.928
F775_02308 Aegilops tauschii F775_02308 I 0.928
evm.TU.supercontig_80.94 Carica papaya evm.TU.supercontig_80.94 I 0.927
MTR_2g080010 Medicago truncatula MTR_2g080010 I 0.927
27961.m000091 Ricinus communis 27961.m000091 I 0.927
MDP0000868419 Malus domestica MDP0000868419 I 0.927
Sb02g036620 Sorghum bicolor Sb02g036620 I 0.927
GLYMA13G35560 Glycine max GLYMA13G35560 I 0.927
Ca_06901 Cicer arietinum Ca_06901 I 0.927
TCM_031363 Theobroma cacao TCM_031363 I 0.927
SapurV1A.0299s0130 Salix purpurea SapurV1A.0299s0130 I 0.927
cassava5169.m1 Manihot esculenta cassava5169.m1 I 0.927
GRMZM2G179885 Zea mays GRMZM2G179885 I 0.927
Gorai.002G073800 Gossypium raimondii Gorai.002G073800 I 0.927
Gorai.009G433100 Gossypium raimondii Gorai.009G433100 I 0.927
OGLUM07G18780 Oryza glumaepatula OGLUM07G18780 I 0.926
ONIVA07G17340 Oryza nivara ONIVA07G17340 I 0.926
TCM_029931 Theobroma cacao TCM_029931 I 0.926
OBART07G19010 Oryza barthii OBART07G19010 I 0.926
ORGLA07G0243600 Oryza glaberrima ORGLA07G0243600 I 0.926
ORUFI07G19770 Oryza rufipogon ORUFI07G19770 I 0.926
ONAC010 Oryza indica BGIOSGA024071 I 0.926
ONAC010 Oryza sativa OS07G0566500 I 0.925
Gorai.013G167100 Gossypium raimondii Gorai.013G167100 I 0.925
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.925
29851.m002359 Ricinus communis 29851.m002359 I 0.924
Pm009955 Prunus mume Pm009955 I 0.924
Aquca_059_00027 Aquilegia coerulea Aquca_059_00027 I 0.924
PRUPE_ppa007314mg Prunus persica PRUPE_ppa007314mg I 0.924
Cucsa.074600 Cucumis sativus Cucsa.074600 I 0.924
Cla011948 Citrullus lanatus Cla011948 I 0.924
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.924
evm.TU.supercontig_27.81 Carica papaya evm.TU.supercontig_27.81 I 0.924
Bra001597 Brassica rapa Bra001597 I 0.924
OB03G25680 Oryza brachyantha OB03G25680 I 0.924
Gorai.009G170700 Gossypium raimondii Gorai.009G170700 I 0.924
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.923
GLYMA13G31660 Glycine max GLYMA13G31660 I 0.923
OPUNC03G15460 Oryza punctata OPUNC03G15460 I 0.923
MDP0000120881 Malus domestica MDP0000120881 I 0.923
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.922
GSMUA_Achr4G10310_001 Musa acuminata GSMUA_Achr4G10310_001 I 0.922
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.922
Ciclev10015688m.g Citrus clementina Ciclev10015688m.g I 0.922
MDP0000173636 Malus domestica MDP0000173636 I 0.922
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.922
orange1.1g017854m.g Citrus sinensis orange1.1g017854m.g I 0.922
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.922
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.922
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.922
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.922
OBART03G15960 Oryza barthii OBART03G15960 I 0.922
GSMUA_Achr9G19520_001 Musa acuminata GSMUA_Achr9G19520_001 I 0.921
30078.m002348 Ricinus communis 30078.m002348 I 0.921
AMTR_s00003p00252470 Amborella trichopoda AMTR_s00003p00252470 I 0.921
F775_14365 Aegilops tauschii F775_14365 I 0.920
MLOC_8116 Hordeum vulgare MLOC_8116 I 0.920
F775_16000 Aegilops tauschii F775_16000 I 0.920
Traes_2AS_09457EDD8 Triticum aestivum Traes_2AS_09457EDD8 I 0.920
Traes_2DS_5DF921ABB Triticum aestivum Traes_2DS_5DF921ABB I 0.920
Traes_6AS_6F89CC969 Triticum aestivum Traes_6AS_6F89CC969 I 0.920
Traes_6DS_90A627C3F Triticum aestivum Traes_6DS_90A627C3F I 0.920
Pavir.J08552 Panicum virgatum Pavir.J08552 I 0.919
Pavir.Ba00642 Panicum virgatum Pavir.Ba00642 I 0.919
OS03G0327800 Oryza sativa OS03G0327800 I 0.918
mgf025001m Mimulus guttatus mgf025001m I 0.918
mgf007362m Mimulus guttatus mgf007362m I 0.917
PK08629.1 Cannabis sativa PK08629.1 I 0.917
BRADI1G63600 Brachypodium distachyon BRADI1G63600 I 0.917
mgf016382m Mimulus guttatus mgf016382m I 0.917
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.916
gene31150-v1.0-hybrid Fragaria vesca gene31150-v1.0-hybrid I 0.916
Traes_2BS_58AA829F4 Triticum aestivum Traes_2BS_58AA829F4 I 0.916
TRAES3BF108700110CFD_g Triticum aestivum TRAES3BF108700110CFD_g I 0.916
GRMZM2G011598 Zea mays GRMZM2G011598 I 0.916
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.916
SapurV1A.0746s0010 Salix purpurea SapurV1A.0746s0010 I 0.913
Pm011604 Prunus mume Pm011604 I 0.913
SapurV1A.0127s0010 Salix purpurea SapurV1A.0127s0010 I 0.913
SapurV1A.2174s0010 Salix purpurea SapurV1A.2174s0010 I 0.913
Solyc07g063420.2 Solanum lycopersicum Solyc07g063420.2 I 0.913
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I 0.913
PGSC0003DMG400019293 Solanum tuberosum PGSC0003DMG400019293 I 0.913
GLYMA12G34990 Glycine max GLYMA12G34990 I 0.913
BRADI1G24390 Brachypodium distachyon BRADI1G24390 I 0.913
POPTR_0001s41490 Populus trichocarpa POPTR_0001s41490 I 0.913
Cagra.27949s0001 Capsella grandiflora Cagra.27949s0001 I 0.912
GSMUA_Achr6G17720_001 Musa acuminata GSMUA_Achr6G17720_001 I 0.912
GLYMA15G07620 Glycine max GLYMA15G07620 I 0.912
Ca_12660 Cicer arietinum Ca_12660 I 0.909
POPTR_0011s12420 Populus trichocarpa POPTR_0011s12420 I 0.909
GSMUA_Achr1G08860_001 Musa acuminata GSMUA_Achr1G08860_001 I 0.908
GRMZM2G042494 Zea mays GRMZM2G042494 I 0.907
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.907
BRADI1G17480 Brachypodium distachyon BRADI1G17480 I 0.907
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.906
Pavir.J22666 Panicum virgatum Pavir.J22666 I 0.906
LjT04N09.140.nd Lotus japonicus LjT04N09.140.nd I 0.906
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.906
Si030267m.g Setaria italica Si030267m.g I 0.906
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.904
OBART07G26600 Oryza barthii OBART07G26600 I 0.904
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.904
GSMUA_Achr10G04570_001 Musa acuminata GSMUA_Achr10G04570_001 I 0.904
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.904
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.904
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.904
ONIVA07G26310 Oryza nivara ONIVA07G26310 I 0.904
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.904
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.904
Pavir.Bb03737 Panicum virgatum Pavir.Bb03737 I 0.903
GSMUA_Achr6G25380_001 Musa acuminata GSMUA_Achr6G25380_001 I 0.902
OLONG_012944 Oryza longistaminata OLONG_012944 I 0.902
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.902
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.901
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.899
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.899
F775_02328 Aegilops tauschii F775_02328 I 0.898
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.898
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I 0.898
TRIUR3_26867 Triticum urartu TRIUR3_26867 I 0.898
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I 0.898
OB07G32110 Oryza brachyantha OB07G32110 I 0.897
MTR_3g088110 Medicago truncatula MTR_3g088110 I 0.895
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I 0.894
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I 0.894
GLYMA06G11970 Glycine max GLYMA06G11970 I 0.893
Gorai.010G151400 Gossypium raimondii Gorai.010G151400 I 0.893
SELMODRAFT_105213 Selaginella moellendorffii SELMODRAFT_105213 I 0.893
SELMODRAFT_125697 Selaginella moellendorffii SELMODRAFT_125697 I 0.893
OB05G24480 Oryza brachyantha OB05G24480 I 0.892
PK25206.1 Cannabis sativa PK25206.1 I 0.892
Sb02g043210 Sorghum bicolor Sb02g043210 I 0.890
GLYMA04G42800 Glycine max GLYMA04G42800 I 0.889
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I 0.888
Lus10003269.g Linum usitatissimum Lus10003269.g I 0.887
Bra040152 Brassica rapa Bra040152 I 0.886
AMTR_s00009p00259320 Amborella trichopoda AMTR_s00009p00259320 I 0.886
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I 0.886
Bo1g152220 Brassica oleracea Bo1g152220 I 0.886
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I 0.885
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.885
cassava26728.m1 Manihot esculenta cassava26728.m1 I 0.885
orange1.1g021910m.g Citrus sinensis orange1.1g021910m.g I 0.885
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.885
Ciclev10001956m.g Citrus clementina Ciclev10001956m.g I 0.885
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.884
POPTR_0005s20240 Populus trichocarpa POPTR_0005s20240 I 0.884
Solyc06g060230.2 Solanum lycopersicum Solyc06g060230.2 I 0.884
AMTR_s00016p00196760 Amborella trichopoda AMTR_s00016p00196760 N 0.883
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.883
evm.TU.contig_33298 Carica papaya evm.TU.contig_33298 I 0.883
Gorai.009G418700 Gossypium raimondii Gorai.009G418700 I 0.882
Aquca_024_00081 Aquilegia coerulea Aquca_024_00081 I 0.881
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.881
POPTR_0002s08150 Populus trichocarpa POPTR_0002s08150 I 0.881
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.881
Lus10042531.g Linum usitatissimum Lus10042531.g I 0.880
GLYMA02G26480 Glycine max GLYMA02G26480 I 0.880
29648.m002012 Ricinus communis 29648.m002012 I 0.880
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.880
Thhalv10008371m.g Eutrema salsugineum Thhalv10008371m.g I 0.879
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I 0.879
Eucgr.I00056 Eucalyptus grandis Eucgr.I00056 I 0.879
Ciclev10001976m.g Citrus clementina Ciclev10001976m.g I 0.879
Lus10036117.g Linum usitatissimum Lus10036117.g I 0.879
Eucgr.I00058 Eucalyptus grandis Eucgr.I00058 I 0.879
Ca_16379 Cicer arietinum Ca_16379 I 0.879
TCM_026030 Theobroma cacao TCM_026030 I 0.878
29950.m001173 Ricinus communis 29950.m001173 I 0.877
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.877
Lus10007410.g Linum usitatissimum Lus10007410.g I 0.877
gene11226-v1.0-hybrid Fragaria vesca gene11226-v1.0-hybrid I 0.877
VIT_07s0031g02610 Vitis vinifera VIT_07s0031g02610 I 0.876
PRUPE_ppa009380mg Prunus persica PRUPE_ppa009380mg I 0.876
TCM_041055 Theobroma cacao TCM_041055 I 0.876
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.876
Pm004758 Prunus mume Pm004758 I 0.876
NAC047 Arabidopsis thaliana AT3G04070 D 0.876
mgf004020m Mimulus guttatus mgf004020m I 0.876
PGSC0003DMG400025031 Solanum tuberosum PGSC0003DMG400025031 I 0.876
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.876
MTR_2157s0010 Medicago truncatula MTR_2157s0010 I 0.875
Eucgr.I00057 Eucalyptus grandis Eucgr.I00057 I 0.875
OPUNC07G07310 Oryza punctata OPUNC07G07310 I 0.874
Ca_16946 Cicer arietinum Ca_16946 I 0.874
chr3.CM0111.130.nd Lotus japonicus chr3.CM0111.130.nd I 0.874
Cla023536 Citrullus lanatus Cla023536 I 0.873
TCM_007543 Theobroma cacao TCM_007543 I 0.872
Eucgr.I00095 Eucalyptus grandis Eucgr.I00095 I 0.872
Bra031949 Brassica rapa Bra031949 I 0.872
GLYMA13G40251 Glycine max GLYMA13G40251 I 0.871
GSMUA_Achr7G23250_001 Musa acuminata GSMUA_Achr7G23250_001 I 0.871
VIT_06s0004g03080 Vitis vinifera VIT_06s0004g03080 I 0.871