Carubv10011108m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10011108m.g T297496_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC011
M07169_2.00
Arabidopsis thaliana
RTTDCTTSNNHNDCAAGHWAY

RTWDCTTGHNDNNSAAGHAAY
Dap-seq
OMalley et al.(2016)
ANAC011_col_a
0.989 0.939
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10011108m NAC/NAM 7 140

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANAC011 Arabidopsis thaliana AT1G32510 D 0.989
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.943
Si032702m.g Setaria italica Si032702m.g I 0.942
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.941
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.941
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.941
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I 0.874
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.896
Bostr.3359s0109 Boechera stricta Bostr.3359s0109 I 0.988
Cagra.7865s0013 Capsella grandiflora Cagra.7865s0013 I 0.995
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.944
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.944
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.942
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.942
Pavir.J38855 Panicum virgatum Pavir.J38855 I 0.914
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.943
Thhalv10009466m.g Eutrema salsugineum Thhalv10009466m.g I 0.987
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.942
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.941
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.941
Bo8g028730 Brassica oleracea Bo8g028730 I 0.987
Bra035488 Brassica rapa Bra035488 I 0.986
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.906
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.937
F775_13961 Aegilops tauschii F775_13961 I 0.926
ANAC011 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002601 I 0.982
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.944
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.941
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.941
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.941
OB01G20290 Oryza brachyantha OB01G20290 I 0.881
OB09G25590 Oryza brachyantha OB09G25590 I 0.941
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.941
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.941
Bo9g024360 Brassica oleracea Bo9g024360 N 0.914
BRADI3G13630 Brachypodium distachyon BRADI3G13630 N 0.934
gene35011-v1.0-hybrid Fragaria vesca gene35011-v1.0-hybrid N 0.874
gene34005-v1.0-hybrid Fragaria vesca gene34005-v1.0-hybrid N 0.888
Bra037283 Brassica rapa Bra037283 N 0.917
Cla007018 Citrullus lanatus Cla007018 N 0.882
Cucsa.119310 Cucumis sativus Cucsa.119310 N 0.880