Ciclev10001200m.g (Citrus clementina)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Ciclev10001200m.g T297560_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10001199m NAC/NAM 7 133
Ciclev10001200m NAC/NAM 7 133
Ciclev10001201m NAC/NAM 7 133
Ciclev10001204m NAC/NAM 7 133
Ciclev10001205m NAC/NAM 7 133
Ciclev10001206m NAC/NAM 7 133
Ciclev10001210m NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Citrus clementina TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g036240m.g Citrus sinensis orange1.1g036240m.g N 0.974
Aquca_022_00282 Aquilegia coerulea Aquca_022_00282 I 0.948
30136.m001048 Ricinus communis 30136.m001048 N 0.943
GSMUA_Achr11G09000_001 Musa acuminata GSMUA_Achr11G09000_001 N 0.933
PDK_20s1369501g001 Phoenix dactylifera PDK_20s1369501g001 N 0.929
Solyc11g005920.1 Solanum lycopersicum Solyc11g005920.1 N 0.927
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.925
mgf025137m Mimulus guttatus mgf025137m N 0.924
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N 0.919
TCM_028313 Theobroma cacao TCM_028313 N 0.919
cassava43227.valid.m1 Manihot esculenta cassava43227.valid.m1 N 0.916
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.916
cassava43226.valid.m1 Manihot esculenta cassava43226.valid.m1 N 0.916
NAC082 Arabidopsis thaliana AT5G09330 N 0.915
Lus10020896.g Linum usitatissimum Lus10020896.g N 0.914
Bo3g101690 Brassica oleracea Bo3g101690 I 0.912
Bra024263 Brassica rapa Bra024263 I 0.912
evm.TU.supercontig_42.145 Carica papaya evm.TU.supercontig_42.145 I 0.911
LjSGA_024981.1 Lotus japonicus LjSGA_024981.1 N 0.906
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.903
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.903
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.903
Carubv10001139m.g Capsella rubella Carubv10001139m.g N 0.902
Cagra.1365s0106 Capsella grandiflora Cagra.1365s0106 N 0.902
Cla008570 Citrullus lanatus Cla008570 N 0.901
GSMUA_Achr10G04530_001 Musa acuminata GSMUA_Achr10G04530_001 N 0.894
gene27615-v1.0-hybrid Fragaria vesca gene27615-v1.0-hybrid N 0.892
Bostr.13129s0062 Boechera stricta Bostr.13129s0062 N 0.888
POPTR_0005s06040 Populus trichocarpa POPTR_0005s06040 N 0.888
TCM_028311 Theobroma cacao TCM_028311 N 0.884
Bostr.0568s0398 Boechera stricta Bostr.0568s0398 I 0.884
GLYMA06G15840 Glycine max GLYMA06G15840 N 0.878
AMTR_s00071p00055960 Amborella trichopoda AMTR_s00071p00055960 I 0.877
Eucgr.I00213 Eucalyptus grandis Eucgr.I00213 N 0.874