Ciclev10008628m.g (Citrus clementina)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Ciclev10008628m.g T297584_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY

RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.949 0.902
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD

HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.933 0.848
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA

TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.933 0.848
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10008628m NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Citrus clementina TFs

392 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_189431 Agaricus bisporus AGABI2DRAFT_189431 N 0.000
PAXRUDRAFT_822699 Paxillus rubicundulus PAXRUDRAFT_822699 N 0.000
PHACADRAFT_204842 Phanerochaete carnosa PHACADRAFT_204842 N 0.000
PHLGIDRAFT_76399 Phlebiopsis gigantea PHLGIDRAFT_76399 N 0.000
PISMIDRAFT_6278 Pisolithus microcarpus PISMIDRAFT_6278 N 0.000
PLEOSDRAFT_155843 Pleurotus ostreatus PLEOSDRAFT_155843 N 0.000
SCHCODRAFT_104000 Schizophyllum commune SCHCODRAFT_104000 N 0.000
SCLCIDRAFT_1207624 Scleroderma citrinum SCLCIDRAFT_1207624 N 0.000
SERLA73DRAFT_68203 Serpula lacrymans SERLA73DRAFT_68203 N 0.000
fgenesh1_pg.C_scaffold_13000030 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_13000030 N 0.000
Moror_16007 Moniliophthora roreri Moror_16007 N 0.000
M413DRAFT_22142 Hebeloma cylindrosporum M413DRAFT_22142 N 0.000
CC1G_06539 Coprinopsis cinerea CC1G_06539 N 0.000
FOMPIDRAFT_1115920 Fomitopsis pinicola FOMPIDRAFT_1115920 N 0.000
GALMADRAFT_109196 Galerina marginata GALMADRAFT_109196 N 0.000
GLOTRDRAFT_112955 Gloeophyllum trabeum GLOTRDRAFT_112955 N 0.000
HETIRDRAFT_307860 Heterobasidion irregulare HETIRDRAFT_307860 N 0.000
JAAARDRAFT_53352 Jaapia argillacea JAAARDRAFT_53352 N 0.000
K443DRAFT_673496 Laccaria amethystina K443DRAFT_673496 N 0.000
LACBIDRAFT_301156 Laccaria bicolor LACBIDRAFT_301156 N 0.000
M378DRAFT_6232 Amanita muscaria M378DRAFT_6232 N 0.000
Genemark.209_g Heterobasidion annosum Genemark.209_g N 0.000