Ciclev10020717m.g (Citrus clementina)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Ciclev10020717m.g T297615_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC047
M07198_2.00 		Arabidopsis thaliana
CACGB
VCGTG		 Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a 		0.922 0.848
NAC047
M07199_2.00 		Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW		 Dap-seq
OMalley et al.(2016)
ANAC047_col 		0.922 0.848
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.879 0.759
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.879 0.759
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10020717m NAC/NAM 12 141

Links

Other NAC/NAM family TFs
Other Citrus clementina TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.965
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.954
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.954
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I 0.953
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.950
29950.m001173 Ricinus communis 29950.m001173 I 0.947
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.942
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.941
TCM_026030 Theobroma cacao TCM_026030 I 0.941
Lus10042531.g Linum usitatissimum Lus10042531.g I 0.936
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I 0.936
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.934
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I 0.932
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I 0.932
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I 0.929
Cagra.2026s0001 Capsella grandiflora Cagra.2026s0001 I 0.929
Carubv10014000m.g Capsella rubella Carubv10014000m.g I 0.929
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I 0.929
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.927
Bra040152 Brassica rapa Bra040152 I 0.926
Bo1g152220 Brassica oleracea Bo1g152220 I 0.926
anac047 Vitis vinifera VIT_08s0007g07670 I 0.924
Lus10003269.g Linum usitatissimum Lus10003269.g I 0.923
NAC047 Arabidopsis thaliana AT3G04070 D 0.922
Bo5g148420 Brassica oleracea Bo5g148420 I 0.918
Bra031949 Brassica rapa Bra031949 I 0.918
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I 0.916
GLYMA16G26740 Glycine max GLYMA16G26740 I 0.906
Eucgr.A02070 Eucalyptus grandis Eucgr.A02070 I 0.903
Pm025312 Prunus mume Pm025312 I 0.901
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.901
MDP0000180683 Malus domestica MDP0000180683 I 0.901
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.894
MDP0000404409 Malus domestica MDP0000404409 I 0.893
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.893
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.891
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.889
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.889
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.889
30078.m002348 Ricinus communis 30078.m002348 I 0.887
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.885
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.885
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.885
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.885
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.885
GLYMA02G07700 Glycine max GLYMA02G07700 I 0.884
Bra026353 Brassica rapa Bra026353 I 0.883
mgf001766m Mimulus guttatus mgf001766m I 0.883
Bo1g048300 Brassica oleracea Bo1g048300 I 0.883
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.883
Bostr.7867s0562 Boechera stricta Bostr.7867s0562 I 0.882
Cagra.0570s0027 Capsella grandiflora Cagra.0570s0027 I 0.882
RD26 Arabidopsis thaliana AT4G27410 I 0.882
Carubv10005353m.g Capsella rubella Carubv10005353m.g I 0.882
RD26 Arabidopsis lyrata fgenesh2_kg.7__1491__AT4G27410.3 I 0.882
GRMZM2G042494 Zea mays GRMZM2G042494 I 0.880
F775_02308 Aegilops tauschii F775_02308 I 0.879
Thhalv10025818m.g Eutrema salsugineum Thhalv10025818m.g I 0.879
Bra019052 Brassica rapa Bra019052 I 0.879
Bra021114 Brassica rapa Bra021114 I 0.879
Cucsa.341800 Cucumis sativus Cucsa.341800 I 0.879
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.879
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.879
NAC018 Arabidopsis thaliana AT1G52880 D 0.879
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.879
Bo7g111390 Brassica oleracea Bo7g111390 I 0.879
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.879
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.879
Bo1g128420 Brassica oleracea Bo1g128420 I 0.879
MDP0000674514 Malus domestica MDP0000674514 I 0.878
GRMZM2G011598 Zea mays GRMZM2G011598 I 0.875
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.874
GLYMA06G38440 Glycine max GLYMA06G38440 I 0.874
OB03G25680 Oryza brachyantha OB03G25680 I 0.874
Cla023770 Citrullus lanatus Cla023770 I 0.873
Bo3g066880 Brassica oleracea Bo3g066880 I 0.872
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.871
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.871
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.871
OBART07G26600 Oryza barthii OBART07G26600 I 0.871
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.871
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.871
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.871