CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Eucgr.A02028
(
Eucalyptus grandis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Eucgr.A02028
T297672_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.A02028.1
NAC/NAM
28
155
LPGFRFHPTDEELVAFYLKRKVENKPLSIELIKHVDIYKYDPWDLPKVSTVGEKEWYFFCMRGRKYRNSIRPNRVTGSGFWKATGIDKQIHAAKEPHDCIGLKKSLVYYCGSAGKGTKTDWMMHEFRL
Eucgr.A02028.2
NAC/NAM
28
154
LPGFRFHPTDEELVAFYLKRKVENKPLSIELIKHVDIYKYDPWDLPSNTVGEKEWYFFCMRGRKYRNSIRPNRVTGSGFWKATGIDKQIHAAKEPHDCIGLKKSLVYYCGSAGKGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Eucalyptus grandis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10030478.g
Linum usitatissimum
Lus10030478.g
I
0.917
SapurV1A.0094s0540
Salix purpurea
SapurV1A.0094s0540
I
0.915
POPTR_0001s11660
Populus trichocarpa
POPTR_0001s11660
I
0.913
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
0.911
MDP0000216714
Malus domestica
MDP0000216714
I
0.903
Aquca_026_00367
Aquilegia coerulea
Aquca_026_00367
I
0.900
Ciclev10032203m.g
Citrus clementina
Ciclev10032203m.g
I
0.899
orange1.1g021785m.g
Citrus sinensis
orange1.1g021785m.g
I
0.899
TCM_029321
Theobroma cacao
TCM_029321
I
0.897
Gorai.010G171100
Gossypium raimondii
Gorai.010G171100
I
0.889
GSMUA_Achr5G02170_001
Musa acuminata
GSMUA_Achr5G02170_001
I
0.881
PGSC0003DMG400001223
Solanum tuberosum
PGSC0003DMG400001223
N
0.881
Pm014764
Prunus mume
Pm014764
I
0.880
Pm011037
Prunus mume
Pm011037
I
0.878
Bo4g018490
Brassica oleracea
Bo4g018490
I
0.877
PRUPE_ppa026843mg
Prunus persica
PRUPE_ppa026843mg
I
0.875
Solyc05g021090.2
Solanum lycopersicum
Solyc05g021090.2
N
0.875
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
0.874
GLYMA02G45371
Glycine max
GLYMA02G45371
I
0.871
PRUPE_ppa022043mg
Prunus persica
PRUPE_ppa022043mg
I
0.871