Eucgr.I00060 (Eucalyptus grandis)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Eucgr.I00060 T297765_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.934 0.789
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.934 0.789
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.934 0.789
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.929 0.798
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.I00060.1 NAC/NAM 9 132
Eucgr.I00060.2 NAC/NAM 9 132

Links

Other NAC/NAM family TFs
Other Eucalyptus grandis TFs

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29794.m003368 Ricinus communis 29794.m003368 N 0.000
SIGC Arabidopsis lyrata Al_scaffold_0005_2291 N 0.000
AMTR_s00056p00209700 Amborella trichopoda AMTR_s00056p00209700 N 0.000
Aquca_001_00199 Aquilegia coerulea Aquca_001_00199 N 0.000
SIGC Arabidopsis thaliana AT3G53920 N 0.000
Bo4g120510 Brassica oleracea Bo4g120510 N 0.000
Bostr.11793s0002 Boechera stricta Bostr.11793s0002 N 0.000
Bra014857 Brassica rapa Bra014857 N 0.000
Cagra.2252s0020 Capsella grandiflora Cagra.2252s0020 N 0.000
Carubv10016920m.g Capsella rubella Carubv10016920m.g N 0.000
cassava18263.valid.m1 Manihot esculenta cassava18263.valid.m1 N 0.000
Ca_14896 Cicer arietinum Ca_14896 N 0.000
Ciclev10007968m.g Citrus clementina Ciclev10007968m.g N 0.000
Eucgr.C00620 Eucalyptus grandis Eucgr.C00620 N 0.000
gene09028-v1.0-hybrid Fragaria vesca gene09028-v1.0-hybrid N 0.000
GLYMA14G22170 Glycine max GLYMA14G22170 N 0.000
GLYMA17G26620 Glycine max GLYMA17G26620 N 0.000
Gorai.010G103500 Gossypium raimondii Gorai.010G103500 N 0.000
GSMUA_Achr4G01060_001 Musa acuminata GSMUA_Achr4G01060_001 N 0.000
MDP0000135483 Malus domestica MDP0000135483 N 0.000
MDP0000315125 Malus domestica MDP0000315125 N 0.000
mgf012819m Mimulus guttatus mgf012819m N 0.000
MTR_1g007370 Medicago truncatula MTR_1g007370 N 0.000
orange1.1g009449m.g Citrus sinensis orange1.1g009449m.g N 0.000
PDK_20s1533271g001 Phoenix dactylifera PDK_20s1533271g001 N 0.000
PGSC0003DMG400025465 Solanum tuberosum PGSC0003DMG400025465 N 0.000
PK05603.1 Cannabis sativa PK05603.1 N 0.000
Pm005208 Prunus mume Pm005208 N 0.000
PRUPE_ppa003696mg Prunus persica PRUPE_ppa003696mg N 0.000
SapurV1A.0890s0100 Salix purpurea SapurV1A.0890s0100 N 0.000
Solyc08g065970.2 Solanum lycopersicum Solyc08g065970.2 N 0.000
TCM_037242 Theobroma cacao TCM_037242 N 0.000
Thhalv10010251m.g Eutrema salsugineum Thhalv10010251m.g N 0.000
SIGC Vitis vinifera VIT_04s0008g00600 N 0.000