Eucgr.J01038 (Eucalyptus grandis)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Eucgr.J01038 T297801_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC078
M02372_2.00
Arabidopsis thaliana
NNRCAMGHMANN

NNTKDCKTGYNN
PBM
Weirauch et al.(2014)
pTH7209
0.877 0.851
NAC078
M07226_2.00
Arabidopsis thaliana
TTDCTTGNDNNDCAAG

CTTGHNNHNCAAGHAA
Dap-seq
OMalley et al.(2016)
NAC2_colamp_a
0.877 0.851
NAC078
M07227_2.00
Arabidopsis thaliana
DTTWCTTGNNNNRCAAG

CTTGYNNNNCAAGWAAH
Dap-seq
OMalley et al.(2016)
NAC2_col_v3a
0.877 0.851
NAC078
M11083_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC078_Q2
0.877 0.851
ANAC050
M07200_2.00
Arabidopsis thaliana
CTTGHNNYNCAAGNA

TNCTTGNRNNDCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a
0.876 0.754
ANAC050
M07201_2.00
Arabidopsis thaliana
CTTGNNNHRCAMGBHA

TDVCKTGYDNNNCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a
0.876 0.754
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.J01038.1 NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Eucalyptus grandis TFs

Invalid Input OrderBy

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action