CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.K01228
(
Eucalyptus grandis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Eucgr.K01228
T297804_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
JUB1
M07191_2.00
Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR
Dap-seq
OMalley et al.(2016)
ANAC042_col_a
0.898
0.798
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.K01228.1
NAC/NAM
26
153
LPGFRFYPTDEELVGFYLRRKVEKKPLKIEFIKQVDIYKYDPWDLHDVSKMGEKEGYFFCIRGRKYKNSIRPNRVTGSGFWKATGIDKPIYSGKYPHNCVGLKKTLVYYRGSAGRGTKTDWMMHEFRL
Eucgr.K01228.2
NAC/NAM
3
78
EKEGYFFCIRGRKYKNSIRPNRVTGSGFWKATGIDKPIYSGKYPHNCVGLKKTLVYYRGSAGRGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Eucalyptus grandis
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK01104.1
Cannabis sativa
PK01104.1
I
0.944
GLYMA14G03441
Glycine max
GLYMA14G03441
I
0.932
GLYMA02G45371
Glycine max
GLYMA02G45371
I
0.927
chr2.LjT04L10.100.nc
Lotus japonicus
chr2.LjT04L10.100.nc
I
0.925
SapurV1A.0354s0230
Salix purpurea
SapurV1A.0354s0230
I
0.925
Gorai.001G091900
Gossypium raimondii
Gorai.001G091900
I
0.924
Aquca_026_00367
Aquilegia coerulea
Aquca_026_00367
I
0.922
Ciclev10032203m.g
Citrus clementina
Ciclev10032203m.g
I
0.921
orange1.1g021785m.g
Citrus sinensis
orange1.1g021785m.g
I
0.921
POPTR_0002s05820
Populus trichocarpa
POPTR_0002s05820
I
0.918
cassava34069.m1
Manihot esculenta
cassava34069.m1
I
0.918
anac042
Vitis vinifera
VIT_12s0028g00860
I
0.916
Gorai.009G357700
Gossypium raimondii
Gorai.009G357700
I
0.916
Cla005599
Citrullus lanatus
Cla005599
I
0.915
Pm014764
Prunus mume
Pm014764
I
0.914
Ciclev10005465m.g
Citrus clementina
Ciclev10005465m.g
I
0.911
mgf023960m
Mimulus guttatus
mgf023960m
I
0.911
orange1.1g046948m.g
Citrus sinensis
orange1.1g046948m.g
I
0.911
Ciclev10006695m.g
Citrus clementina
Ciclev10006695m.g
I
0.911
Gorai.013G085000
Gossypium raimondii
Gorai.013G085000
I
0.911
TCM_001955
Theobroma cacao
TCM_001955
I
0.911
Ca_15236
Cicer arietinum
Ca_15236
I
0.910
POPTR_0007s08340
Populus trichocarpa
POPTR_0007s08340
I
0.909
VIT_19s0027g00870
Vitis vinifera
VIT_19s0027g00870
I
0.909
VIT_19s0027g00880
Vitis vinifera
VIT_19s0027g00880
I
0.909
cassava20477.m1
Manihot esculenta
cassava20477.m1
I
0.909
PDK_20s1311871g001
Phoenix dactylifera
PDK_20s1311871g001
I
0.909
PRUPE_ppa022043mg
Prunus persica
PRUPE_ppa022043mg
I
0.908
Gorai.004G270400
Gossypium raimondii
Gorai.004G270400
I
0.907
30169.m006343
Ricinus communis
30169.m006343
I
0.907
Cucsa.118320
Cucumis sativus
Cucsa.118320
I
0.907
Cla013684
Citrullus lanatus
Cla013684
I
0.907
POPTR_0005s22710
Populus trichocarpa
POPTR_0005s22710
I
0.905
Solyc02g087920.2
Solanum lycopersicum
Solyc02g087920.2
I
0.904
PGSC0003DMG400001323
Solanum tuberosum
PGSC0003DMG400001323
I
0.904
PGSC0003DMG400031266
Solanum tuberosum
PGSC0003DMG400031266
I
0.903
GLYMA15G40950
Glycine max
GLYMA15G40950
I
0.902
Eucgr.F01463
Eucalyptus grandis
Eucgr.F01463
I
0.902
gene03833-v1.0-hybrid
Fragaria vesca
gene03833-v1.0-hybrid
I
0.902
Traes_5BL_38DFDFE41
Triticum aestivum
Traes_5BL_38DFDFE41
I
0.901
Traes_5DL_0713E8429
Triticum aestivum
Traes_5DL_0713E8429
I
0.901
TRIUR3_01901
Triticum urartu
TRIUR3_01901
I
0.901
Traes_5AL_F35B9FF8E
Triticum aestivum
Traes_5AL_F35B9FF8E
I
0.901
BRADI4G30177
Brachypodium distachyon
BRADI4G30177
I
0.901
OLONG_016322
Oryza longistaminata
OLONG_016322
I
0.900
BGIOSGA009044
Oryza indica
BGIOSGA009044
I
0.900
OMERI02G31030
Oryza meridionalis
OMERI02G31030
I
0.900
ONIVA06G04660
Oryza nivara
ONIVA06G04660
I
0.900
ORGLA02G0278900
Oryza glaberrima
ORGLA02G0278900
I
0.900
OS02G0745250
Oryza sativa
OS02G0745250
I
0.900
OPUNC02G29910
Oryza punctata
OPUNC02G29910
I
0.900
OGLUM02G33000
Oryza glumaepatula
OGLUM02G33000
I
0.900
Pavir.Ab02998
Panicum virgatum
Pavir.Ab02998
I
0.900
AC198937.4_FG005
Zea mays
AC198937.4_FG005
I
0.900
GRMZM2G152543
Zea mays
GRMZM2G152543
I
0.900
VIT_01s0026g02360
Vitis vinifera
VIT_01s0026g02360
I
0.900
CM1835.10.nc
Lotus japonicus
CM1835.10.nc
I
0.900
GRMZM2G100593
Zea mays
GRMZM2G100593
I
0.900
ORUFI02G34050
Oryza rufipogon
ORUFI02G34050
I
0.900
Sb04g028015
Sorghum bicolor
Sb04g028015
I
0.900
LPERR02G26510
Leersia perrieri
LPERR02G26510
I
0.900
OBART02G32360
Oryza barthii
OBART02G32360
I
0.900
Pavir.Aa00706
Panicum virgatum
Pavir.Aa00706
I
0.900
MTR_5g040420
Medicago truncatula
MTR_5g040420
I
0.900
Si019308m.g
Setaria italica
Si019308m.g
I
0.900
OB02G39340
Oryza brachyantha
OB02G39340
I
0.900
Pavir.Bb02181
Panicum virgatum
Pavir.Bb02181
I
0.899
Gorai.002G036700
Gossypium raimondii
Gorai.002G036700
I
0.899
Solyc05g007550.1
Solanum lycopersicum
Solyc05g007550.1
I
0.899
LjT46I09.50.nd
Lotus japonicus
LjT46I09.50.nd
I
0.899
Pm015876
Prunus mume
Pm015876
I
0.898
anac042
Arabidopsis lyrata
fgenesh2_kg.4__2460__AT2G43000.1
I
0.898
VIT_19s0027g00860
Vitis vinifera
VIT_19s0027g00860
I
0.898
JUB1
Arabidopsis thaliana
AT2G43000
D
0.898
Eucgr.I01940
Eucalyptus grandis
Eucgr.I01940
I
0.898
cassava21730.m1
Manihot esculenta
cassava21730.m1
I
0.897
mgf025649m
Mimulus guttatus
mgf025649m
I
0.897
29032.m000021
Ricinus communis
29032.m000021
I
0.897
PRUPE_ppa016710mg
Prunus persica
PRUPE_ppa016710mg
I
0.897
Traes_6AL_0D7866801
Triticum aestivum
Traes_6AL_0D7866801
I
0.896
Sb02g024593
Sorghum bicolor
Sb02g024593
I
0.896
Traes_6DL_DA233B945
Triticum aestivum
Traes_6DL_DA233B945
I
0.896
Si015514m.g
Setaria italica
Si015514m.g
I
0.896
Traes_6BL_A169A3ECB
Triticum aestivum
Traes_6BL_A169A3ECB
I
0.896
Aquca_002_00586
Aquilegia coerulea
Aquca_002_00586
I
0.896
Bostr.25993s0479
Boechera stricta
Bostr.25993s0479
I
0.896
orange1.1g015827m.g
Citrus sinensis
orange1.1g015827m.g
I
0.896
Pavir.Fa00893
Panicum virgatum
Pavir.Fa00893
I
0.896
Pavir.J08304
Panicum virgatum
Pavir.J08304
I
0.896
Lus10007263.g
Linum usitatissimum
Lus10007263.g
I
0.896
Lus10015367.g
Linum usitatissimum
Lus10015367.g
I
0.896
BRADI3G59380
Brachypodium distachyon
BRADI3G59380
I
0.896
cassava45330.m1
Manihot esculenta
cassava45330.m1
I
0.895
orange1.1g047852m.g
Citrus sinensis
orange1.1g047852m.g
I
0.895
anac094
Vitis vinifera
VIT_14s0108g00860
I
0.894
BGIOSGA028728
Oryza indica
BGIOSGA028728
I
0.894
LPERR08G13170
Leersia perrieri
LPERR08G13170
I
0.894
GLYMA18G15020
Glycine max
GLYMA18G15020
I
0.894
GSMUA_Achr6G02680_001
Musa acuminata
GSMUA_Achr6G02680_001
I
0.894
Ciclev10031623m.g
Citrus clementina
Ciclev10031623m.g
I
0.894
SapurV1A.0552s0060
Salix purpurea
SapurV1A.0552s0060
I
0.894
cassava38350.m1
Manihot esculenta
cassava38350.m1
I
0.894
mgf026196m
Mimulus guttatus
mgf026196m
I
0.894
29813.m001479
Ricinus communis
29813.m001479
I
0.894
Bra004736
Brassica rapa
Bra004736
I
0.894
MDP0000186765
Malus domestica
MDP0000186765
I
0.894
Cla023594
Citrullus lanatus
Cla023594
I
0.894
GLYMA08G41260
Glycine max
GLYMA08G41260
I
0.894
OGLUM08G16650
Oryza glumaepatula
OGLUM08G16650
I
0.894
OBART08G15880
Oryza barthii
OBART08G15880
I
0.894
OB08G23420
Oryza brachyantha
OB08G23420
I
0.894
ONIVA08G17120
Oryza nivara
ONIVA08G17120
I
0.894
OMERI08G13180
Oryza meridionalis
OMERI08G13180
I
0.894
ORUFI08G17800
Oryza rufipogon
ORUFI08G17800
I
0.894
OPUNC08G13940
Oryza punctata
OPUNC08G13940
I
0.894
Cucsa.285120
Cucumis sativus
Cucsa.285120
I
0.893
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
0.893
Si032144m.g
Setaria italica
Si032144m.g
I
0.893
Carubv10023730m.g
Capsella rubella
Carubv10023730m.g
I
0.893
Cagra.0202s0012
Capsella grandiflora
Cagra.0202s0012
I
0.893
MDP0000241821
Malus domestica
MDP0000241821
I
0.893
Gorai.006G017700
Gossypium raimondii
Gorai.006G017700
I
0.893
POPTR_0004s12850
Populus trichocarpa
POPTR_0004s12850
I
0.892
Gorai.005G141200
Gossypium raimondii
Gorai.005G141200
I
0.892
Sb07g021400
Sorghum bicolor
Sb07g021400
I
0.892
SapurV1A.2645s0010
Salix purpurea
SapurV1A.2645s0010
I
0.892
SapurV1A.2065s0010
Salix purpurea
SapurV1A.2065s0010
I
0.892
OS08G0436700
Oryza sativa
OS08G0436700
I
0.892
Aquca_006_00295
Aquilegia coerulea
Aquca_006_00295
I
0.892
Ciclev10011891m.g
Citrus clementina
Ciclev10011891m.g
I
0.892
Bostr.12659s0312
Boechera stricta
Bostr.12659s0312
I
0.892
Ca_18749
Cicer arietinum
Ca_18749
I
0.891
GLYMA19G02580
Glycine max
GLYMA19G02580
I
0.891
GLYMA13G05350
Glycine max
GLYMA13G05350
I
0.891
TCM_018508
Theobroma cacao
TCM_018508
I
0.891
MTR_6g011860
Medicago truncatula
MTR_6g011860
I
0.891
GRMZM2G159094
Zea mays
GRMZM2G159094
I
0.890
TRIUR3_04784
Triticum urartu
TRIUR3_04784
I
0.890
Bo4g192870
Brassica oleracea
Bo4g192870
I
0.890
Traes_5AL_F2A49EB8E
Triticum aestivum
Traes_5AL_F2A49EB8E
I
0.890
Bo3g036290
Brassica oleracea
Bo3g036290
I
0.890
Bra000282
Brassica rapa
Bra000282
I
0.890
evm.TU.supercontig_128.20
Carica papaya
evm.TU.supercontig_128.20
I
0.890
Bra037743
Brassica rapa
Bra037743
I
0.890
FEZ
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002274
I
0.890
Solyc02g069960.2
Solanum lycopersicum
Solyc02g069960.2
I
0.890
Pm006506
Prunus mume
Pm006506
I
0.889
POPTR_0017s11830
Populus trichocarpa
POPTR_0017s11830
I
0.889
GSMUA_Achr5G02170_001
Musa acuminata
GSMUA_Achr5G02170_001
I
0.889
Eucgr.G02506
Eucalyptus grandis
Eucgr.G02506
I
0.889
Lus10036749.g
Linum usitatissimum
Lus10036749.g
I
0.889
SapurV1A.0085s0430
Salix purpurea
SapurV1A.0085s0430
I
0.889
PRUPE_ppa022278mg
Prunus persica
PRUPE_ppa022278mg
I
0.889
Lus10037178.g
Linum usitatissimum
Lus10037178.g
I
0.889
Thhalv10017054m.g
Eutrema salsugineum
Thhalv10017054m.g
I
0.888
F775_04018
Aegilops tauschii
F775_04018
I
0.888
Ca_26322
Cicer arietinum
Ca_26322
I
0.888
GLYMA02G11900
Glycine max
GLYMA02G11900
I
0.888
GLYMA01G05680
Glycine max
GLYMA01G05680
I
0.888
TCM_032393
Theobroma cacao
TCM_032393
I
0.887
Cla010347
Citrullus lanatus
Cla010347
I
0.887
PGSC0003DMG400021119
Solanum tuberosum
PGSC0003DMG400021119
I
0.886
MLOC_60079
Hordeum vulgare
MLOC_60079
I
0.886
FEZ
Arabidopsis thaliana
AT1G26870
I
0.885
Cagra.1150s0013
Capsella grandiflora
Cagra.1150s0013
I
0.885
Traes_5BL_2131D2B17
Triticum aestivum
Traes_5BL_2131D2B17
I
0.885
Traes_2BS_2244C64CC
Triticum aestivum
Traes_2BS_2244C64CC
I
0.885
Carubv10011253m.g
Capsella rubella
Carubv10011253m.g
I
0.885
GLYMA08G41995
Glycine max
GLYMA08G41995
I
0.885
MTR_8g467490
Medicago truncatula
MTR_8g467490
I
0.884
TRIUR3_04556
Triticum urartu
TRIUR3_04556
I
0.884
TRIUR3_04557
Triticum urartu
TRIUR3_04557
I
0.884
Si036447m.g
Setaria italica
Si036447m.g
I
0.883
chr3.CM0176.150.nc
Lotus japonicus
chr3.CM0176.150.nc
I
0.883
BRADI3G37067
Brachypodium distachyon
BRADI3G37067
I
0.883
Thhalv10007709m.g
Eutrema salsugineum
Thhalv10007709m.g
I
0.883
Bo8g076410
Brassica oleracea
Bo8g076410
I
0.883
Pavir.J26531
Panicum virgatum
Pavir.J26531
I
0.882
Pavir.J03639
Panicum virgatum
Pavir.J03639
I
0.882
Traes_2AS_C73DE621D
Triticum aestivum
Traes_2AS_C73DE621D
I
0.880
Bo5g045190
Brassica oleracea
Bo5g045190
I
0.880
Traes_2BS_3B6ABF5E6
Triticum aestivum
Traes_2BS_3B6ABF5E6
I
0.880
LPERR03G30390
Leersia perrieri
LPERR03G30390
I
0.880
Bra024677
Brassica rapa
Bra024677
I
0.880
Gorai.012G054800
Gossypium raimondii
Gorai.012G054800
I
0.880
ORUFI03G37500
Oryza rufipogon
ORUFI03G37500
I
0.878
BGIOSGA013656
Oryza indica
BGIOSGA013656
I
0.878
OS03G0777000
Oryza sativa
OS03G0777000
I
0.878
Bra016294
Brassica rapa
Bra016294
I
0.878
Carubv10021514m.g
Capsella rubella
Carubv10021514m.g
I
0.878
F775_23219
Aegilops tauschii
F775_23219
I
0.878
Traes_2DS_8C3F6A558
Triticum aestivum
Traes_2DS_8C3F6A558
I
0.878
ONIVA10G12510
Oryza nivara
ONIVA10G12510
I
0.878
GLYMA18G13574
Glycine max
GLYMA18G13574
I
0.877
POPTR_0005s10080
Populus trichocarpa
POPTR_0005s10080
I
0.877
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.876
Traes_2DS_E2F2E9EAF
Triticum aestivum
Traes_2DS_E2F2E9EAF
I
0.876
OGLUM03G35790
Oryza glumaepatula
OGLUM03G35790
I
0.876
F775_22220
Aegilops tauschii
F775_22220
I
0.876
PGSC0003DMG400039898
Solanum tuberosum
PGSC0003DMG400039898
I
0.876
Thhalv10019631m.g
Eutrema salsugineum
Thhalv10019631m.g
I
0.875
OBART03G36060
Oryza barthii
OBART03G36060
I
0.875
OPUNC03G33030
Oryza punctata
OPUNC03G33030
I
0.875
OMERI03G33230
Oryza meridionalis
OMERI03G33230
I
0.875
ORGLA03G0330500
Oryza glaberrima
ORGLA03G0330500
I
0.875
MTR_5g090970
Medicago truncatula
MTR_5g090970
I
0.874
Bra004403
Brassica rapa
Bra004403
I
0.874
GRMZM2G112548
Zea mays
GRMZM2G112548
I
0.872
Gorai.004G270300
Gossypium raimondii
Gorai.004G270300
I
0.872
Lus10031767.g
Linum usitatissimum
Lus10031767.g
I
0.871
Lus10031189.g
Linum usitatissimum
Lus10031189.g
I
0.871