CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_10.25
(
Carica papaya
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
evm.TU.supercontig_10.25
T297829_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_10.25
NAC/NAM
13
136
PAGFRFHPKDEELVCDYLMKKVTRRTSFDFFIDVDLNSCEPWDIPETGCVGGKEWYFYSQRDRKYATGARTNRATASGYWKATGKDRAVLRKATLVGMRKTLVFYQGRAPKGTKTDWVMHEFRI
Links
Other
NAC/NAM
family TFs
Other
Carica papaya
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.952
Ca_13537
Cicer arietinum
Ca_13537
N
0.943
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.938
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.927
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.919
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.919
F775_30297
Aegilops tauschii
F775_30297
I
0.919
Pavir.Fb00532
Panicum virgatum
Pavir.Fb00532
N
0.897
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.896
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.893
Si014180m.g
Setaria italica
Si014180m.g
N
0.890
MDP0000298182
Malus domestica
MDP0000298182
N
0.889
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.889
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.889
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.885
GSMUA_Achr8G33310_001
Musa acuminata
GSMUA_Achr8G33310_001
N
0.884
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.884
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.882
Solyc07g066330.2
Solanum lycopersicum
Solyc07g066330.2
N
0.878
29650.m000275
Ricinus communis
29650.m000275
N
0.876