gene08448-v1.0-hybrid (Fragaria vesca)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gene08448-v1.0-hybrid T297927_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.903 0.526
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.903 0.526
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.903 0.526
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.887 0.526
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.871 0.474
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna08448.1-v1.0-hybrid NAC/NAM 18 143

Links

Other NAC/NAM family TFs
Other Fragaria vesca TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc06g074170.2 Solanum lycopersicum Solyc06g074170.2 I 0.986
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I 0.986
PGSC0003DMG400005892 Solanum tuberosum PGSC0003DMG400005892 I 0.985
GLYMA12G31211 Glycine max GLYMA12G31211 I 0.985
TCM_041332 Theobroma cacao TCM_041332 N 0.983
Ciclev10028618m.g Citrus clementina Ciclev10028618m.g N 0.982
Gorai.006G113700 Gossypium raimondii Gorai.006G113700 N 0.981
Gorai.009G083500 Gossypium raimondii Gorai.009G083500 N 0.981
MDP0000133636 Malus domestica MDP0000133636 N 0.981
Solyc11g068750.1 Solanum lycopersicum Solyc11g068750.1 I 0.981
PGSC0003DMG400019615 Solanum tuberosum PGSC0003DMG400019615 I 0.981
POPTR_0009s16290 Populus trichocarpa POPTR_0009s16290 N 0.980
30055.m001612 Ricinus communis 30055.m001612 N 0.977
evm.TU.supercontig_195.35 Carica papaya evm.TU.supercontig_195.35 N 0.976
PRUPE_ppa008321mg Prunus persica PRUPE_ppa008321mg N 0.974
cassava16016.m1 Manihot esculenta cassava16016.m1 N 0.973
SapurV1A.0561s0300 Salix purpurea SapurV1A.0561s0300 N 0.972
Lus10034183.g Linum usitatissimum Lus10034183.g N 0.969
Lus10043402.g Linum usitatissimum Lus10043402.g N 0.969
Bra021471 Brassica rapa Bra021471 N 0.964
Carubv10019187m.g Capsella rubella Carubv10019187m.g N 0.963
Bo1g063720 Brassica oleracea Bo1g063720 N 0.962
anac060 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000902 N 0.961
NAC60 Arabidopsis thaliana AT3G44290 N 0.959
Eucgr.B03823 Eucalyptus grandis Eucgr.B03823 N 0.957
Bo3g016820 Brassica oleracea Bo3g016820 I 0.956
Bra006619 Brassica rapa Bra006619 I 0.956
Bo2g023820 Brassica oleracea Bo2g023820 N 0.950
Bra020182 Brassica rapa Bra020182 N 0.950
Lus10013316.g Linum usitatissimum Lus10013316.g N 0.948
Lus10005204.g Linum usitatissimum Lus10005204.g N 0.948
Bra002403 Brassica rapa Bra002403 N 0.947
Ca_20988 Cicer arietinum Ca_20988 I 0.943
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.943
Bostr.0556s0726 Boechera stricta Bostr.0556s0726 N 0.941
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.939
Bostr.26527s0049 Boechera stricta Bostr.26527s0049 N 0.936
anac089 Arabidopsis lyrata scaffold_602275.1 N 0.936
Cagra.0846s0004 Capsella grandiflora Cagra.0846s0004 N 0.936
Carubv10001357m.g Capsella rubella Carubv10001357m.g N 0.936
NAC089 Arabidopsis thaliana AT5G22290 N 0.934
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I 0.932
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I 0.930
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.929
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.929
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.929
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.927
Si013369m.g Setaria italica Si013369m.g I 0.926
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I 0.925
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.925
MLOC_50406 Hordeum vulgare MLOC_50406 I 0.924
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I 0.924
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I 0.924
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I 0.924
F775_30082 Aegilops tauschii F775_30082 I 0.924
TRIUR3_32613 Triticum urartu TRIUR3_32613 I 0.924
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I 0.923
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.921
OLONG_000105 Oryza longistaminata OLONG_000105 I 0.920
OPUNC08G03310 Oryza punctata OPUNC08G03310 I 0.920
OMERI08G03500 Oryza meridionalis OMERI08G03500 I 0.920
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I 0.920
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.920
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I 0.920
OBART08G03460 Oryza barthii OBART08G03460 I 0.920
OB08G13730 Oryza brachyantha OB08G13730 I 0.919
Sb07g003900 Sorghum bicolor Sb07g003900 I 0.919
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.919
LPERR08G03510 Leersia perrieri LPERR08G03510 I 0.919
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.918
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.918
Thhalv10002027m.g Eutrema salsugineum Thhalv10002027m.g I 0.918
mgf022344m Mimulus guttatus mgf022344m I 0.918
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.917
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.915
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.912
OS08G0157900 Oryza sativa OS08G0157900 I 0.911
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.911
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.911
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.911
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.910
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.910
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.910
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.909
ANAC040 Arabidopsis lyrata fgenesh2_kg.4__689__AT2G27300.1 I 0.909
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I 0.908
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I 0.908
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.908
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.907
Lus10015587.g Linum usitatissimum Lus10015587.g I 0.907
Lus10032919.g Linum usitatissimum Lus10032919.g I 0.907
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.906
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.906
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.906
GLYMA13G39090 Glycine max GLYMA13G39090 N 0.905
Pm019659 Prunus mume Pm019659 I 0.905
GLYMA14G36840 Glycine max GLYMA14G36840 I 0.904
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.904
PK26157.1 Cannabis sativa PK26157.1 I 0.904
TCM_015535 Theobroma cacao TCM_015535 I 0.904
MTR_2g086880 Medicago truncatula MTR_2g086880 N 0.904
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I 0.903
Cla008773 Citrullus lanatus Cla008773 N 0.903
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.903
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.903
anac032 Vitis vinifera VIT_18s0001g02300 I 0.903
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.903
Bo5g001100 Brassica oleracea Bo5g001100 I 0.903
Bra033239 Brassica rapa Bra033239 I 0.903
NAC002 Arabidopsis thaliana AT1G01720 D 0.903
TCM_035160 Theobroma cacao TCM_035160 I 0.902
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.902
Bra027596 Brassica rapa Bra027596 I 0.901
Bo5g002810 Brassica oleracea Bo5g002810 I 0.900
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.900
Ca_27204 Cicer arietinum Ca_27204 I 0.899
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.898
Cucsa.185800 Cucumis sativus Cucsa.185800 N 0.898
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.898
Ca_07077 Cicer arietinum Ca_07077 N 0.897
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.897
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.896
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.895
Bo9g004070 Brassica oleracea Bo9g004070 I 0.894
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.892
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I 0.892
Bra036328 Brassica rapa Bra036328 I 0.892
Thhalv10002040m.g Eutrema salsugineum Thhalv10002040m.g I 0.892
Pm028711 Prunus mume Pm028711 I 0.892
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.891
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.891
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.890
MTR_8g023930 Medicago truncatula MTR_8g023930 I 0.890
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.889
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.889
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.889
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.888
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.888
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I 0.887
NAC48 Oryza sativa OS01G0884300 D 0.887
OPUNC01G38300 Oryza punctata OPUNC01G38300 I 0.887
OBART01G39590 Oryza barthii OBART01G39590 I 0.887
ONIVA01G44460 Oryza nivara ONIVA01G44460 I 0.887
OMERI01G36460 Oryza meridionalis OMERI01G36460 I 0.887
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I 0.887
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I 0.887
OB01G48340 Oryza brachyantha OB01G48340 I 0.887
LPERR01G34090 Leersia perrieri LPERR01G34090 I 0.887
TRIUR3_14109 Triticum urartu TRIUR3_14109 I 0.887
F775_28813 Aegilops tauschii F775_28813 I 0.887
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I 0.887
BGIOSGA000374 Oryza indica BGIOSGA000374 I 0.887
Sb03g041920 Sorghum bicolor Sb03g041920 I 0.887
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I 0.887
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.887
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.886
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I 0.886
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.886
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N 0.886
GSMUA_Achr2G11810_001 Musa acuminata GSMUA_Achr2G11810_001 I 0.886
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I 0.886
BGIOSGA019897 Oryza indica BGIOSGA019897 I 0.886
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.886
ONIVA05G17670 Oryza nivara ONIVA05G17670 I 0.886
MDP0000282616 Malus domestica MDP0000282616 I 0.886
TCM_029796 Theobroma cacao TCM_029796 I 0.885
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.885
GRMZM2G014653 Zea mays GRMZM2G014653 I 0.885
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.885
Si002413m.g Setaria italica Si002413m.g I 0.885
Cla011239 Citrullus lanatus Cla011239 N 0.884
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I 0.884
OB05G24820 Oryza brachyantha OB05G24820 I 0.883
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.883
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.883
Pavir.Bb00806 Panicum virgatum Pavir.Bb00806 I 0.883
MTR_5g069030 Medicago truncatula MTR_5g069030 I 0.883
Bo5g002850 Brassica oleracea Bo5g002850 I 0.883
Pavir.Ba03301 Panicum virgatum Pavir.Ba03301 I 0.882
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.882
Si030752m.g Setaria italica Si030752m.g I 0.882
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.882
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.881
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.881
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N 0.881
MLOC_59162 Hordeum vulgare MLOC_59162 I 0.881
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I 0.880
OMERI01G15210 Oryza meridionalis OMERI01G15210 I 0.878
GSMUA_Achr4G29170_001 Musa acuminata GSMUA_Achr4G29170_001 I 0.878
F775_20638 Aegilops tauschii F775_20638 I 0.878
OMERI01G15230 Oryza meridionalis OMERI01G15230 I 0.878
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.878
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I 0.878
MLOC_65286 Hordeum vulgare MLOC_65286 I 0.878
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.877
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.877
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.877
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.877
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.877
MTR_3g093050 Medicago truncatula MTR_3g093050 I 0.877
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.877
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.876
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.876
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.876
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.876
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.876
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.876
mgf013201m Mimulus guttatus mgf013201m I 0.876
OB09G25590 Oryza brachyantha OB09G25590 I 0.876
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.876
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.876
ORUFI05G18190 Oryza rufipogon ORUFI05G18190 I 0.876
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.875
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.875
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.875
Si032702m.g Setaria italica Si032702m.g I 0.875
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.875
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.875
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.875
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.875
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.875
LPERR07G06440 Leersia perrieri LPERR07G06440 I 0.874
PK07042.1 Cannabis sativa PK07042.1 N 0.874
Ca_04069 Cicer arietinum Ca_04069 I 0.874
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.873
ONIVA01G00280 Oryza nivara ONIVA01G00280 I 0.873
ONIVA01G18370 Oryza nivara ONIVA01G18370 I 0.873
BGIOSGA002597 Oryza indica BGIOSGA002597 I 0.873
BGIOSGA001578 Oryza indica BGIOSGA001578 I 0.873
OBART01G00360 Oryza barthii OBART01G00360 I 0.873
MDP0000136652 Malus domestica MDP0000136652 N 0.873
MDP0000182344 Malus domestica MDP0000182344 N 0.873
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I 0.873
OS01G0393100 Oryza sativa OS01G0393100 I 0.873
Gorai.005G013000 Gossypium raimondii Gorai.005G013000 N 0.873
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I 0.873
OLONG_022415 Oryza longistaminata OLONG_022415 I 0.873
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I 0.873
OBART01G16620 Oryza barthii OBART01G16620 I 0.873
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I 0.873
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I 0.873
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.871
NAC69 Arabidopsis thaliana AT4G01550 D 0.871
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I 0.871
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.871
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.871