gene18636-v1.0-hybrid (Fragaria vesca)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gene18636-v1.0-hybrid T297960_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC043
M02370_2.00
Arabidopsis thaliana
NTTACGYWAN

NTWRCGTAAN
PBM
Weirauch et al.(2014)
pTH8161
0.959 0.930
NAC043
M07192_2.00
Arabidopsis thaliana
TRCKTVHDNHNYAMG

CKTRNDNHDBAMGYA
Dap-seq
OMalley et al.(2016)
NST1_colamp_a
0.959 0.930
NAC043
M07193_2.00
Arabidopsis thaliana
RCKTVHDNHNYAMGYWA

TWRCKTRNDNHDBAMGY
Dap-seq
OMalley et al.(2016)
NST1_col_v31
0.959 0.930
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.940 0.904
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN

NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.936 0.904
NAC066
M00978_2.00
Arabidopsis thaliana
NBNNHNBNNN

NNNVNDNNVN
PBM
Lindemose et al.(2014)
NST2
0.930 0.877
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN

NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.928 0.904
SMB
M07184_2.00
Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH

DRTWRCKTRNDNHDBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_col_a
0.882 0.816
SMB
M07185_2.00
Arabidopsis thaliana
TWNCKTVNNNNNYAMG

CKTRNNNNNBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_colamp_a
0.882 0.816
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna18636.1-v1.0-hybrid NAC/NAM 16 143

Links

Other NAC/NAM family TFs
Other Fragaria vesca TFs

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pm018292 Prunus mume Pm018292 I 0.971
MDP0000563165 Malus domestica MDP0000563165 I 0.971
PRUPE_ppa020746mg Prunus persica PRUPE_ppa020746mg I 0.971
cassava33021.m1 Manihot esculenta cassava33021.m1 I 0.967
27964.m000369 Ricinus communis 27964.m000369 I 0.967
TCM_005047 Theobroma cacao TCM_005047 I 0.966
Cucsa.120870 Cucumis sativus Cucsa.120870 I 0.966
Cla006806 Citrullus lanatus Cla006806 I 0.966
Lus10002687.g Linum usitatissimum Lus10002687.g I 0.965
Gorai.007G112500 Gossypium raimondii Gorai.007G112500 I 0.965
Lus10030205.g Linum usitatissimum Lus10030205.g I 0.965
LjSGA_027787.1 Lotus japonicus LjSGA_027787.1 I 0.964
Ca_22426 Cicer arietinum Ca_22426 I 0.964
MTR_8g024480 Medicago truncatula MTR_8g024480 I 0.964
GLYMA16G02200 Glycine max GLYMA16G02200 I 0.964
GLYMA07G05660 Glycine max GLYMA07G05660 I 0.964
AMTR_s00113p00077540 Amborella trichopoda AMTR_s00113p00077540 I 0.964
Ca_22425 Cicer arietinum Ca_22425 I 0.963
PK04961.1 Cannabis sativa PK04961.1 I 0.963
Gorai.001G150800 Gossypium raimondii Gorai.001G150800 I 0.963
SapurV1A.0162s0220 Salix purpurea SapurV1A.0162s0220 I 0.962
POPTR_0014s10060 Populus trichocarpa POPTR_0014s10060 I 0.962
Ciclev10024035m.g Citrus clementina Ciclev10024035m.g I 0.960
POPTR_0002s17950 Populus trichocarpa POPTR_0002s17950 I 0.960
ANAC012 Vitis vinifera VIT_02s0025g02710 I 0.960
orange1.1g015853m.g Citrus sinensis orange1.1g015853m.g I 0.960
NAC043 Arabidopsis thaliana AT2G46770 D 0.959
Bo4g006990 Brassica oleracea Bo4g006990 I 0.959
Carubv10023503m.g Capsella rubella Carubv10023503m.g I 0.959
Bra004509 Brassica rapa Bra004509 I 0.959
NST1 Arabidopsis lyrata scaffold_403649.1 I 0.959
Thhalv10001506m.g Eutrema salsugineum Thhalv10001506m.g I 0.959
Bostr.25993s0090 Boechera stricta Bostr.25993s0090 I 0.959
Cagra.0050s0024 Capsella grandiflora Cagra.0050s0024 I 0.959
mgf022455m Mimulus guttatus mgf022455m I 0.958
GSMUA_Achr3G12230_001 Musa acuminata GSMUA_Achr3G12230_001 I 0.957
Bo4g197330 Brassica oleracea Bo4g197330 I 0.957
Bra040486 Brassica rapa Bra040486 I 0.957
Cla011508 Citrullus lanatus Cla011508 I 0.956
VIT_15s0048g02660 Vitis vinifera VIT_15s0048g02660 I 0.956
Cucsa.193460 Cucumis sativus Cucsa.193460 I 0.956
GSMUA_Achr9G24450_001 Musa acuminata GSMUA_Achr9G24450_001 I 0.955
GSMUA_Achr7G05980_001 Musa acuminata GSMUA_Achr7G05980_001 I 0.955
Aquca_037_00272 Aquilegia coerulea Aquca_037_00272 I 0.954
PDK_20s1408241g001 Phoenix dactylifera PDK_20s1408241g001 I 0.953
Sb10g002120 Sorghum bicolor Sb10g002120 I 0.951
Cagra.0483s0052 Capsella grandiflora Cagra.0483s0052 I 0.951
Carubv10019223m.g Capsella rubella Carubv10019223m.g I 0.951
GRMZM2G171395 Zea mays GRMZM2G171395 I 0.951
Si006565m.g Setaria italica Si006565m.g I 0.951
GSMUA_AchrUn_randomG21980_001 Musa acuminata GSMUA_AchrUn_randomG21980_001 I 0.950
Gorai.008G130300 Gossypium raimondii Gorai.008G130300 I 0.949
GRMZM2G092465 Zea mays GRMZM2G092465 I 0.949
cassava32649.m1 Manihot esculenta cassava32649.m1 I 0.949
Pavir.J21162 Panicum virgatum Pavir.J21162 I 0.949
GRMZM2G069047 Zea mays GRMZM2G069047 I 0.949
Sb07g001550 Sorghum bicolor Sb07g001550 I 0.949
Pavir.J20698 Panicum virgatum Pavir.J20698 I 0.949
SapurV1A.0003s0530 Salix purpurea SapurV1A.0003s0530 I 0.947
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I 0.946
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I 0.946
Bra007640 Brassica rapa Bra007640 I 0.946
Bra003478 Brassica rapa Bra003478 I 0.946
Bostr.13158s0196 Boechera stricta Bostr.13158s0196 I 0.946
F775_11081 Aegilops tauschii F775_11081 I 0.946
MLOC_66924 Hordeum vulgare MLOC_66924 I 0.946
OMERI06G01850 Oryza meridionalis OMERI06G01850 I 0.940
OPUNC06G01800 Oryza punctata OPUNC06G01800 I 0.940
ORGLA06G0019800 Oryza glaberrima ORGLA06G0019800 I 0.940
ORUFI06G01950 Oryza rufipogon ORUFI06G01950 I 0.940
OGLUM06G01950 Oryza glumaepatula OGLUM06G01950 I 0.940
OS06G0131700 Oryza sativa OS06G0131700 D 0.940
ONIVA06G02290 Oryza nivara ONIVA06G02290 I 0.940
LPERR06G01790 Leersia perrieri LPERR06G01790 I 0.940
OBART06G01950 Oryza barthii OBART06G01950 I 0.940
OB06G11970 Oryza brachyantha OB06G11970 I 0.940
BGIOSGA022006 Oryza indica BGIOSGA022006 I 0.940
Pavir.J07835 Panicum virgatum Pavir.J07835 I 0.940
ONIVA08G01130 Oryza nivara ONIVA08G01130 I 0.939
ORGLA08G0004900 Oryza glaberrima ORGLA08G0004900 I 0.939
ORUFI08G01170 Oryza rufipogon ORUFI08G01170 I 0.939
OS08G0115800 Oryza sativa OS08G0115800 I 0.939
OGLUM08G01180 Oryza glumaepatula OGLUM08G01180 I 0.939
OBART08G01110 Oryza barthii OBART08G01110 I 0.939
BGIOSGA027883 Oryza indica BGIOSGA027883 I 0.939
OPUNC08G01110 Oryza punctata OPUNC08G01110 I 0.939
OB08G11290 Oryza brachyantha OB08G11290 I 0.939
Eucgr.D01671 Eucalyptus grandis Eucgr.D01671 I 0.938
NST2 Arabidopsis lyrata scaffold_503455.1 I 0.938
LPERR08G01440 Leersia perrieri LPERR08G01440 I 0.938
Ciclev10021141m.g Citrus clementina Ciclev10021141m.g I 0.937
cassava42638.valid.m1 Manihot esculenta cassava42638.valid.m1 I 0.937
orange1.1g014260m.g Citrus sinensis orange1.1g014260m.g I 0.937
30068.m002591 Ricinus communis 30068.m002591 I 0.937
TCM_015621 Theobroma cacao TCM_015621 I 0.937
PGSC0003DMG400011268 Solanum tuberosum PGSC0003DMG400011268 I 0.937
Solyc10g005010.2 Solanum lycopersicum Solyc10g005010.2 I 0.937
Gorai.004G129200 Gossypium raimondii Gorai.004G129200 I 0.937
gene01881-v1.0-hybrid Fragaria vesca gene01881-v1.0-hybrid I 0.937
Cagra.14513s0001 Capsella grandiflora Cagra.14513s0001 I 0.936
Bo5g049360 Brassica oleracea Bo5g049360 I 0.936
OMERI08G01360 Oryza meridionalis OMERI08G01360 I 0.936
Carubv10011900m.g Capsella rubella Carubv10011900m.g I 0.936
Thhalv10009336m.g Eutrema salsugineum Thhalv10009336m.g I 0.936
ANAC012 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002619 I 0.936
Pm024260 Prunus mume Pm024260 I 0.936
NAC012 Arabidopsis thaliana AT1G32770 D 0.936
PRUPE_ppa006801mg Prunus persica PRUPE_ppa006801mg I 0.936
gene18635-v1.0-hybrid Fragaria vesca gene18635-v1.0-hybrid I 0.936
Bostr.3359s0081 Boechera stricta Bostr.3359s0081 I 0.935
cassava45846.m1 Manihot esculenta cassava45846.m1 I 0.934
BRADI3G13727 Brachypodium distachyon BRADI3G13727 I 0.934
Gorai.003G077700 Gossypium raimondii Gorai.003G077700 I 0.934
Gorai.008G259700 Gossypium raimondii Gorai.008G259700 I 0.933
Bra023288 Brassica rapa Bra023288 I 0.933
Lus10017340.g Linum usitatissimum Lus10017340.g I 0.933
Lus10001664.g Linum usitatissimum Lus10001664.g I 0.933
SapurV1A.0941s0070 Salix purpurea SapurV1A.0941s0070 I 0.932
Gorai.006G205300 Gossypium raimondii Gorai.006G205300 I 0.932
POPTR_0001s45250 Populus trichocarpa POPTR_0001s45250 I 0.932
SapurV1A.2717s0010 Salix purpurea SapurV1A.2717s0010 I 0.932
NAC066 Arabidopsis thaliana AT3G61910 D 0.930
Bra010183 Brassica rapa Bra010183 I 0.930
Bo5g086900 Brassica oleracea Bo5g086900 I 0.930
PK22182.1 Cannabis sativa PK22182.1 I 0.930
SapurV1A.0131s0060 Salix purpurea SapurV1A.0131s0060 I 0.930
Eucgr.E01053 Eucalyptus grandis Eucgr.E01053 I 0.930
POPTR_0011s15640 Populus trichocarpa POPTR_0011s15640 I 0.930
MDP0000762302 Malus domestica MDP0000762302 D 0.928
MDP0000140229 Malus domestica MDP0000140229 I 0.928
Lus10008271.g Linum usitatissimum Lus10008271.g I 0.928
Lus10033239.g Linum usitatissimum Lus10033239.g I 0.928
Bo6g079180 Brassica oleracea Bo6g079180 I 0.927
GRMZM2G091490 Zea mays GRMZM2G091490 I 0.926
evm.TU.supercontig_37.89 Carica papaya evm.TU.supercontig_37.89 I 0.925
GSMUA_Achr2G20020_001 Musa acuminata GSMUA_Achr2G20020_001 I 0.922
GSMUA_Achr10G14400_001 Musa acuminata GSMUA_Achr10G14400_001 I 0.920
Aquca_030_00252 Aquilegia coerulea Aquca_030_00252 I 0.918
AMTR_s00068p00207380 Amborella trichopoda AMTR_s00068p00207380 I 0.915
Sb10g020860 Sorghum bicolor Sb10g020860 I 0.907
GRMZM2G104074 Zea mays GRMZM2G104074 I 0.907
GRMZM2G041746 Zea mays GRMZM2G041746 I 0.907
BRADI3G09520 Brachypodium distachyon BRADI3G09520 I 0.906
LPERR02G09170 Leersia perrieri LPERR02G09170 I 0.905
OB02G19660 Oryza brachyantha OB02G19660 I 0.905
Lus10009939.g Linum usitatissimum Lus10009939.g I 0.905
BRADI1G38730 Brachypodium distachyon BRADI1G38730 I 0.905
TRIUR3_14210 Triticum urartu TRIUR3_14210 I 0.904
F775_42361 Aegilops tauschii F775_42361 I 0.904
MLOC_17128 Hordeum vulgare MLOC_17128 I 0.904
Traes_7DL_AD6EAD1A6 Triticum aestivum Traes_7DL_AD6EAD1A6 I 0.904
Traes_7AL_46F73E667 Triticum aestivum Traes_7AL_46F73E667 I 0.904
Traes_7DL_AD6EAD1A61 Triticum aestivum Traes_7DL_AD6EAD1A61 I 0.904
Sb04g009180 Sorghum bicolor Sb04g009180 I 0.903
Pavir.Da01009 Panicum virgatum Pavir.Da01009 I 0.903
Pavir.J05053 Panicum virgatum Pavir.J05053 I 0.903
Si007822m.g Setaria italica Si007822m.g I 0.903
TRIUR3_14543 Triticum urartu TRIUR3_14543 I 0.902
F775_21627 Aegilops tauschii F775_21627 I 0.902
Lus10030143.g Linum usitatissimum Lus10030143.g I 0.902
TRIUR3_27911 Triticum urartu TRIUR3_27911 I 0.900
Si017641m.g Setaria italica Si017641m.g I 0.900
Pavir.Aa02770 Panicum virgatum Pavir.Aa02770 I 0.900
Pavir.Ab01037 Panicum virgatum Pavir.Ab01037 I 0.900
PGSC0003DMG400012113 Solanum tuberosum PGSC0003DMG400012113 I 0.897
evm.TU.supercontig_118.26 Carica papaya evm.TU.supercontig_118.26 I 0.895
Traes_4AL_8FABAA6C3 Triticum aestivum Traes_4AL_8FABAA6C3 I 0.894
TRIUR3_14544 Triticum urartu TRIUR3_14544 I 0.894
TRIUR3_14545 Triticum urartu TRIUR3_14545 I 0.894
Traes_4AL_3AFF9664B Triticum aestivum Traes_4AL_3AFF9664B I 0.894
OPUNC02G09610 Oryza punctata OPUNC02G09610 I 0.892
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.889
PK10271.1 Cannabis sativa PK10271.1 I 0.889
PRUPE_ppa025341mg Prunus persica PRUPE_ppa025341mg I 0.887
Ca_13929 Cicer arietinum Ca_13929 I 0.887
Pm010886 Prunus mume Pm010886 I 0.887
29725.m000235 Ricinus communis 29725.m000235 I 0.887
OBART02G10820 Oryza barthii OBART02G10820 I 0.886
BGIOSGA007898 Oryza indica BGIOSGA007898 I 0.886
GLYMA19G44890 Glycine max GLYMA19G44890 I 0.886
ORGLA02G0097800 Oryza glaberrima ORGLA02G0097800 I 0.886
ONIVA02G12010 Oryza nivara ONIVA02G12010 I 0.886
gene19898-v1.0-hybrid Fragaria vesca gene19898-v1.0-hybrid I 0.886
OLONG_007664 Oryza longistaminata OLONG_007664 I 0.886
OGLUM02G10770 Oryza glumaepatula OGLUM02G10770 I 0.886
Bo6g123980 Brassica oleracea Bo6g123980 I 0.884
Bra035127 Brassica rapa Bra035127 I 0.884
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.884
OS02G0252200 Oryza sativa OS02G0252200 I 0.883
GSMUA_Achr10G21750_001 Musa acuminata GSMUA_Achr10G21750_001 I 0.883
ORUFI02G10740 Oryza rufipogon ORUFI02G10740 I 0.883
GLYMA08G17140 Glycine max GLYMA08G17140 I 0.882
Thhalv10019534m.g Eutrema salsugineum Thhalv10019534m.g I 0.882
MTR_2g062730 Medicago truncatula MTR_2g062730 I 0.882
SMB Arabidopsis lyrata scaffold_202942.1 I 0.882
Bostr.20129s0396 Boechera stricta Bostr.20129s0396 I 0.882
SMB Vitis vinifera VIT_19s0085g01210 I 0.882
cassava32687.m1 Manihot esculenta cassava32687.m1 I 0.882
LjSGA_059487.1 Lotus japonicus LjSGA_059487.1 I 0.882
SMB Arabidopsis thaliana AT1G79580 D 0.882
Carubv10020504m.g Capsella rubella Carubv10020504m.g I 0.882
Bo6g080930 Brassica oleracea Bo6g080930 I 0.882
Cagra.1725s0032 Capsella grandiflora Cagra.1725s0032 I 0.882
TRIUR3_32451 Triticum urartu TRIUR3_32451 I 0.880
Cla005561 Citrullus lanatus Cla005561 I 0.880
Cucsa.240210 Cucumis sativus Cucsa.240210 I 0.880
BGIOSGA021116 Oryza indica BGIOSGA021116 I 0.879
OB06G24850 Oryza brachyantha OB06G24850 I 0.879
ONIVA06G20460 Oryza nivara ONIVA06G20460 I 0.879
POPTR_0008s07950 Populus trichocarpa POPTR_0008s07950 I 0.879
OBART06G17120 Oryza barthii OBART06G17120 I 0.879
POPTR_0010s18420 Populus trichocarpa POPTR_0010s18420 I 0.879
SapurV1A.0164s0070 Salix purpurea SapurV1A.0164s0070 I 0.879
SapurV1A.0093s0460 Salix purpurea SapurV1A.0093s0460 I 0.879
ORUFI06G18140 Oryza rufipogon ORUFI06G18140 I 0.879
OS06G0530400 Oryza sativa OS06G0530400 I 0.879
OGLUM06G18230 Oryza glumaepatula OGLUM06G18230 I 0.879
OMERI06G17980 Oryza meridionalis OMERI06G17980 I 0.879
Gorai.004G268500 Gossypium raimondii Gorai.004G268500 I 0.878
cassava39971.m1 Manihot esculenta cassava39971.m1 I 0.878
TCM_033728 Theobroma cacao TCM_033728 I 0.877
Bo2g095440 Brassica oleracea Bo2g095440 I 0.877
OPUNC06G15490 Oryza punctata OPUNC06G15490 I 0.877
LPERR06G14120 Leersia perrieri LPERR06G14120 I 0.877
MDP0000501518 Malus domestica MDP0000501518 I 0.876
MDP0000652584 Malus domestica MDP0000652584 I 0.876
Traes_4AL_2257954B9 Triticum aestivum Traes_4AL_2257954B9 I 0.874
Solyc12g017400.1 Solanum lycopersicum Solyc12g017400.1 I 0.873
GLYMA19G44910 Glycine max GLYMA19G44910 N 0.873
MTR_4g035590 Medicago truncatula MTR_4g035590 I 0.873
PGSC0003DMG400009665 Solanum tuberosum PGSC0003DMG400009665 I 0.873
Ca_15792 Cicer arietinum Ca_15792 I 0.873
F775_21626 Aegilops tauschii F775_21626 I 0.873
mgf009391m Mimulus guttatus mgf009391m I 0.873
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.872
Bra003602 Brassica rapa Bra003602 I 0.872
GSMUA_Achr11G17510_001 Musa acuminata GSMUA_Achr11G17510_001 I 0.872
F775_17666 Aegilops tauschii F775_17666 N 0.872
Bra008423 Brassica rapa Bra008423 I 0.872
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.872
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.872
Pm019488 Prunus mume Pm019488 I 0.872
Pm019490 Prunus mume Pm019490 I 0.872
28200.m000189 Ricinus communis 28200.m000189 I 0.872
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.872
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.872
mgf025569m Mimulus guttatus mgf025569m I 0.872
TCM_016035 Theobroma cacao TCM_016035 I 0.872
Traes_7DS_5CB1C2862 Triticum aestivum Traes_7DS_5CB1C2862 N 0.872
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.872
30147.m014211 Ricinus communis 30147.m014211 I 0.871
PK11173.1 Cannabis sativa PK11173.1 I 0.871