TF Information

gene18636-v1.0-hybrid *(Fragaria vesca)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	gene18636-v1.0-hybrid	T297960_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC043 M02370_2.00	Arabidopsis thaliana	NTTACGYWAN	NTWRCGTAAN	PBM Weirauch et al.(2014) pTH8161	0.959	0.930
NAC043 M07192_2.00	Arabidopsis thaliana	TRCKTVHDNHNYAMG	CKTRNDNHDBAMGYA	Dap-seq OMalley et al.(2016) NST1_colamp_a	0.959	0.930
NAC043 M07193_2.00	Arabidopsis thaliana	RCKTVHDNHNYAMGYWA	TWRCKTRNDNHDBAMGY	Dap-seq OMalley et al.(2016) NST1_col_v31	0.959	0.930
OS06G0131700 M02378_2.00	Oryza sativa	NNNNHMDNND	HNNHKDNNNN	PBM Weirauch et al.(2014) pTH8356	0.940	0.904
NAC012 M00971_2.00	Arabidopsis thaliana	NYAMGYHANN	NNTDRCKTRN	PBM Lindemose et al.(2014) SND1	0.936	0.904
NAC066 M00978_2.00	Arabidopsis thaliana	NBNNHNBNNN	NNNVNDNNVN	PBM Lindemose et al.(2014) NST2	0.930	0.877
MDP0000762302 M02383_2.00	Malus domestica	NNNAMKHNWN	NWNDMKTNNN	PBM Weirauch et al.(2014) pTH9205	0.928	0.904
SMB M07184_2.00	Arabidopsis thaliana	TWNCKTVHDNHNYAMGYWAYH	DRTWRCKTRNDNHDBAMGNWA	Dap-seq OMalley et al.(2016) SMB_col_a	0.882	0.816
SMB M07185_2.00	Arabidopsis thaliana	TWNCKTVNNNNNYAMG	CKTRNNNNNBAMGNWA	Dap-seq OMalley et al.(2016) SMB_colamp_a	0.882	0.816
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
mrna18636.1-v1.0-hybrid	NAC/NAM	16	143	PPGFRFHPTEEELLQYYLRKKVSNQRIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVISSNCRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Fragaria vesca* TFs

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252 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action